Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0401 |
Symbol | |
ID | 6408048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 429106 |
End bp | 430305 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642710312 |
Product | radical SAM enzyme, Cfr family |
Protein accession | YP_001989437 |
Protein GI | 192288832 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.213699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCCTT CTGCAGCCTC GGCCCTGGTC GAGAAGACCC CGCTGGAAAC CTATGTGCCG CCGGCCAAGC CGTCGCTGAT CGGGCTGTCG CGGGCGCAAT TGTGCGACCG GCTCGGCGAC GTCGGGGTGG CGCCGCCCCA GCGCAAGATG CGGGCGCAGC AGCTCTGGCA CTGGATGTAT GTCCGCGGCG CCCGTGACTT CTCCGAAATG ACCAATGTCT CCAAGGAGAT GCGGGCAACG CTGGCGGAGC ACTTCACGGT CGACCGGCCC GAAGTTGTGG CCGAGCAGAT TTCGGCCGAC GGCACCCGCA AATGGCTGCT GCGGCTGCCG AGCGGCGGCG ACGGCCAAAA GGCTCACGAG GTCGAGTGCG TCTATATCCC GGAGACCGAC CGCGGCACGC TGTGCGTCTC CAGCCAGGTC GGCTGCACCC TGAATTGCGC GTTCTGTCAC ACCGGCACCC AGCGCCTGGT GCGCAACCTC ACGGCCGGCG AGATCGTCGG CCAAGTGATG GTGGCGCGCG ACCGGCTGGG TGACTGGATC GACCGCGAGA CACCGAACGG CAACCGCCTG ATCACCAACA TCGTGATGAT GGGGATGGGC GAGCCGCTGT ACAATTTCGA TGCGGTGCGC GACGCGCTGC TGATCGTCTC CGACAATGAA GGCATCGGCA TCTCGCGGCG GCGGATCACG CTGTCGACCT CCGGCGTGGT GCCGAACATC AAGCGCACCG GCGACGAGAT CGGCGTGATG CTGGCGATTT CGCTGCACGC GGTGCGCGAC GAACTCCGCG ACGAGCTGGT GCCGCTGAAC CGCAAATATC CGCTGAAGGA ATTGCTACAG GCCTGCCGCG ACTATCCGGG CGCGTCCAAC GCTCGCCGCA TCACCTTCGA ATACGTGATG CTGAAGGGCG TCAACGACTC GCTCGACGAT GCGCGCAAGC TGGTACAGTT GCTCAAGGGG ATTCCGGCCA AGATCAATCT GATCCCGTTC AATCCATGGC CGGGCTCGAA CTACGAGTGC TCGGACTGGG ACCAGATCGA GAAGTTCTCG GAATACGTTT TCAACGCCGG CTACTCGTCG CCGGTGCGCA CCCCGCGCGG CCGCGACATT CTGGCGGCCT GCGGCCAGCT CAAATCCGAA ACCGAAAAGC TCTCGGTGCG CGAACGCAAC GCGCTCCGCG CGATGGCGAT GACGGACTGA
|
Protein sequence | MTPSAASALV EKTPLETYVP PAKPSLIGLS RAQLCDRLGD VGVAPPQRKM RAQQLWHWMY VRGARDFSEM TNVSKEMRAT LAEHFTVDRP EVVAEQISAD GTRKWLLRLP SGGDGQKAHE VECVYIPETD RGTLCVSSQV GCTLNCAFCH TGTQRLVRNL TAGEIVGQVM VARDRLGDWI DRETPNGNRL ITNIVMMGMG EPLYNFDAVR DALLIVSDNE GIGISRRRIT LSTSGVVPNI KRTGDEIGVM LAISLHAVRD ELRDELVPLN RKYPLKELLQ ACRDYPGASN ARRITFEYVM LKGVNDSLDD ARKLVQLLKG IPAKINLIPF NPWPGSNYEC SDWDQIEKFS EYVFNAGYSS PVRTPRGRDI LAACGQLKSE TEKLSVRERN ALRAMAMTD
|
| |