Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0400 |
Symbol | |
ID | 6408047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 428508 |
End bp | 429101 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642710311 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_001989436 |
Protein GI | 192288831 |
COG category | [R] General function prediction only |
COG ID | [COG1896] Predicted hydrolases of HD superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.71248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCCCG CCAACGAGAT CAAGGGCGTG CTCGCCTTCC TGCGGGAGGC CGAGCGGCTC AAGAGCGTGA TCCGCAGCGG GTACACGTCA ACCGGCCGCC CCGAGAGCAC CGCCGAACAC ACCTGGCGTC TGTGCCTGAT GGCAATGCTG CTTGCCGACG GGCTCGGCGA TATCGACGTC GCTCGCCTTT TGAAGATCTG CATCGTCCAC GACCTCGGTG AAGCCCTGCA CGGCGACGTG CCGGCGGTGG CCCAGGTGGA GGGTGACGAC AGAGCCGCAC GGGAGCGCGC CGATATCGAA ACTCTGACGC AGTCGCTCGA CGACAAGCGC CGCGCTGAGC TTCTGGGTTT GTGGCATGAC TACGAGACCG GAGCCTCGCC GGAAGGACGG CTCGCCAAGG GGCTCGATAA GCTGGAGACC ATCCTGCAAC ACACCCAGGG CCTCAACCCG GCCGACTTCG ACTACGCGTT CAATCTCGAT TACGGCGCCA GGCACACCGC AGTTCATCCG CTGGTGAGCG CGATCCGCGC CGAACTCGAC AACGACACAA GGGCGCGGAT GGCAGCGCAG CAAGCTTCCG GAGCACCCCA CTGA
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Protein sequence | MLPANEIKGV LAFLREAERL KSVIRSGYTS TGRPESTAEH TWRLCLMAML LADGLGDIDV ARLLKICIVH DLGEALHGDV PAVAQVEGDD RAARERADIE TLTQSLDDKR RAELLGLWHD YETGASPEGR LAKGLDKLET ILQHTQGLNP ADFDYAFNLD YGARHTAVHP LVSAIRAELD NDTRARMAAQ QASGAPH
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