Gene Rpal_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0397 
Symbol 
ID6408044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp425794 
End bp427131 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content65% 
IMG OID642710308 
Productargininosuccinate synthase 
Protein accessionYP_001989433 
Protein GI192288828 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACGA TCTTGAAAAG CCTGCCCAAG GGCGAAAACG TCGGCATCGC TTTCTCAGGG 
GGTCTCGATA CCAGCGCGGC GCTGCTGTGG ATGAAGCAGA AGGGCGCCAA GGTGTTCGCC
TATACGGCGA ACCTCGGCCA GCCCGACGAG GCCGACTACG ACGCGATCCC GCGCAAGGCG
ATGGAGTTCG GCGCCGAGAA GGCCCGGCTG GTCGACTGCC GCACCCAGCT GGTGCACGAA
GGCATCGCGG CGATCCAGGC CGGCGCCTTC CACGTCTCGA CCGGCGGCAT CGCGTATTTC
AACACCACCC CGCTCGGCCG CGCCGTGACC GGCACCATGC TGGTGTCGGC GATGAAGGAA
GACGGCGTCA ACATCTGGGG CGACGGCTCG ACCTACAAGG GCAACGACAT CGAGCGGTTC
TACCGCTACG GCCTGCTCAC CAATCCGGCC TTGCGGATCT ACAAGCCCTG GCTCGACCAG
CAGTTCATCG ACGAGCTCGG CGGCCGCGCC GAGATGTCGG CATTCATGAC CTCGCACGGC
TTCGCCTACA AGATGAGCGC CGAAAAGGCG TACTCGACCG ACAGCAACCT GCTCGGCGCC
ACCCACGAGG CCAAGGATCT CGAACACCTC GACAGCGGCA TCAAGATCGT CAACCCGATC
ATGGGCGTGC CGTTCTGGCG CGACGATTGC GCGGTGAAAG CCGAAGCCGT CACGGTGCGG
TTCGAGGAAG GCCAGCCGGT CGCGCTCAAT GGCCAGACTT TCACGGATCC GGTCGCGATG
TTCTACGAAG CCAATGCCAT TGGCGGACGT CACGGCCTCG GCATGAGCGA CCAGATCGAG
AACCGCATCA TCGAGGCCAA GAGCCGCGGC ATCTACGAGG CGCCCGGCAT GGCGCTGCTG
CACATCGCCT ATGAGCGGCT GGTCACCGGC ATTCACAACG AAGACACCAT CGAGCAGTAC
CGCATCAACG GCATGAAGCT CGGCCGGCTG CTGTATCAGG GCCGCTGGTT CGACTCACAG
GCTTTGATGC TGCGCGAGAC CGCGCAGCGC TGGGTCGCCC GTGCCGTCAC CGGCGAGGTG
ACGCTCGAAC TGCGCCGCGG CAACGACTAC TCGATCCTCA ACACCGTCAG CCCGAACCTG
ACCTACGCGC CGGAGCGGCT GAGCATGGAG AAGGTCGAGG ACGCGCCGTT CACGCCGGCC
GACCGCATCG GCCAGCTCAC CATGCGCAAC CTCGACATCA CCGACACCCG CGCCAAGCTC
GGCCTCTACG CCAAGACCGG CCTGCTGTCC TCCGGCGAAG GCACCCCGAT TCCGCAGCTG
GAAAACGACA AGGGCTGA
 
Protein sequence
MTTILKSLPK GENVGIAFSG GLDTSAALLW MKQKGAKVFA YTANLGQPDE ADYDAIPRKA 
MEFGAEKARL VDCRTQLVHE GIAAIQAGAF HVSTGGIAYF NTTPLGRAVT GTMLVSAMKE
DGVNIWGDGS TYKGNDIERF YRYGLLTNPA LRIYKPWLDQ QFIDELGGRA EMSAFMTSHG
FAYKMSAEKA YSTDSNLLGA THEAKDLEHL DSGIKIVNPI MGVPFWRDDC AVKAEAVTVR
FEEGQPVALN GQTFTDPVAM FYEANAIGGR HGLGMSDQIE NRIIEAKSRG IYEAPGMALL
HIAYERLVTG IHNEDTIEQY RINGMKLGRL LYQGRWFDSQ ALMLRETAQR WVARAVTGEV
TLELRRGNDY SILNTVSPNL TYAPERLSME KVEDAPFTPA DRIGQLTMRN LDITDTRAKL
GLYAKTGLLS SGEGTPIPQL ENDKG