Gene Rpal_0388 details

Gene Information

• Locus tag: Rpal_0388
• ID: 6408035
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 414504
• End bp: 415076
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642710299
• Product: protein of unknown function DUF1566
• Protein accession: YP_001989424
• Protein GI: 192288819

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.470988
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAGAC GCGGCGATCA GGCCGGGACC GGCAGATCGC ATCGCGGTGC GATTGCCGCG 
TTGCTTTGCA TTGCGCTGTC GTTCGCCGCC TCCCCGGCCC GCGCCGATTG CTACGACCGC 
GACCGCAGCG GCCATCAGAC GCGCTTTCGT CTGGCGGCTG CCGAGGCGAT CGACCAGCGT 
ACCGGGCTGA TCTGGCAGCG CTGCTCGGTG GGCAAGAGCT GGAGCGACAA CGCCGGCTGC 
AAGGGCGAGG CCGGTTATTT GGGCCTCGAT CAGGCGATCG CCGCGGCGAG CGCCGCTGGC 
AATGGCTGGC GCGTGCCGTC GGGCACGGAG TTGGAGAGCA TCATCGACAC CGACTGCGGC 
AGCCCGGTGG TCGATACCAC GGTGTTTCCC GACATCGTGC CGACCGAGGA AGGCCTGGCC 
AAATACTGGT CCGTCACGCC GTACGGAATG CTCGACCTGT ACTGGAATTT TGACTTCGTC 
GACGGCCATC CGGACAGCAA CAGCCGGGGT ATCCGCCTCG CCGTGCGGCT GGTGCGCGCG 
GCCAAACCCG AAATCAAGCC GAACGCGAAC TAA 

 

Protein sequence

MIRRGDQAGT GRSHRGAIAA LLCIALSFAA SPARADCYDR DRSGHQTRFR LAAAEAIDQR 
TGLIWQRCSV GKSWSDNAGC KGEAGYLGLD QAIAAASAAG NGWRVPSGTE LESIIDTDCG 
SPVVDTTVFP DIVPTEEGLA KYWSVTPYGM LDLYWNFDFV DGHPDSNSRG IRLAVRLVRA 
AKPEIKPNAN