| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0375 |
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| Symbol | |
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| ID | 6408022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 399947 |
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| End bp | 401131 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710286 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_001989411 |
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| Protein GI | 192288806 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.739562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAT CGTCCCACTC GCCCGGCTTT GCCACCACCG CGATCCACCA CGGCTACGAC
CCGCTGGCGC ATCACGGTGC GCTCAACCCA CCGCTGTTCC TGACCTCGAC CTACGCGTTC
GCCAGCGCCG CTGAGGGAGC GGCGCGGTTC GCCGGCGAGG CCGAAGGCTT CGTGTATTCG
CGGGTCGGCA ATCCGACGGT GGCGGTGCTG GAGAGCCGAC TGGCGGCGCT GGAAGGCGGC
GAGGCCGCGC TCGCCACCGC CTCGGGCGTC GGGGCCCTGA CGGCGCTGAT CTGGACGCTG
CTGAAGACGG GCGACGGCAT CATCGCCGAC CAGATGCTGT ACGGCTGCAC CTTCGGTCTG
TTCGAGCATC ATCTGCCACG GTTCGGCATC GAGGTGGTGT TCGCCGATCT CACCGATCCG
GCCAATCTGC AGGCCGCGCT GCGGCCGAAT ACCCGGCTGG TGTTCACCGA GACCCCGACC
AATCCGAATA TGCGGCTGGT CGACATCGCC GCCTGCGCCG AGATCTGCCG GCGCGCCGAC
GTTCGCCTCG TCGTCGACAA CACCTACTGT ACGCCGTATC TGCAGCGCCC GCTCGATCTC
GGCGCAGATC TCGTCACCCA TTCAGCGACG AAGTATCTCG GCGGCCACGG CGATCTTCTG
GCCGGCGCGG TGGTGGGGCC GAAGGAGATC ATCGATCAGC TCCGCTTCGT CGGCGTTAAG
GAGCTGAACG GTGCCTGCAT CTCGGCGTTC GACGCCTTCC TGATCCTGCG CGGCCTGAAG
ACGTTGAACC TGCGCATGGA TCGCCACAGC GCCACCGCCG TAAAGCTCGC TCACGATCTC
GAAGCGCATC CCGCCGTCGC CGCCGTGTAC TACCCCGGTC TCGACAGCCA CAAGCAGCGC
AACCTCGCGC AGCGGCAGAT GCGCCAGCCC GGCGGCATGA TCGCACTCGA ACTCAGAGGC
GGATTAGCAG CCGGCCGCAG CTTCATGGAC AAGGTGAAGC TGGCGACGCG AGCGGTGAGT
CTCGGCGACG CCGAGACCCT GATCCAACAC CCGGCCAGCA TGACCCACGC GACCTACGAT
CCGGCCGAAC GCGCGCGGCA CGGATTTACG GACGGATTGA TCAGGATCTC AGTAGGACTG
GAGGATTATG AGGATCTGAA ACACGACTTG CTTGGGGCGC TATGA
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| Protein sequence | MTESSHSPGF ATTAIHHGYD PLAHHGALNP PLFLTSTYAF ASAAEGAARF AGEAEGFVYS
RVGNPTVAVL ESRLAALEGG EAALATASGV GALTALIWTL LKTGDGIIAD QMLYGCTFGL
FEHHLPRFGI EVVFADLTDP ANLQAALRPN TRLVFTETPT NPNMRLVDIA ACAEICRRAD
VRLVVDNTYC TPYLQRPLDL GADLVTHSAT KYLGGHGDLL AGAVVGPKEI IDQLRFVGVK
ELNGACISAF DAFLILRGLK TLNLRMDRHS ATAVKLAHDL EAHPAVAAVY YPGLDSHKQR
NLAQRQMRQP GGMIALELRG GLAAGRSFMD KVKLATRAVS LGDAETLIQH PASMTHATYD
PAERARHGFT DGLIRISVGL EDYEDLKHDL LGAL
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