| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0372 |
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| Symbol | |
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| ID | 6408018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 395454 |
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| End bp | 396458 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642710282 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_001989408 |
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| Protein GI | 192288803 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.544933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCGAAA CGCCGGAAAA TCCCGTGAAT GTGGTTGTGG CCGGCGACGA GGGCTCGCAG
CGGCTCGACC GCGTGCTGGC GGCGCGCTGC CCCGAGCTGT CGCGGTCGCG GCTGAAAGCG
CTGATCCTCG ACGGCCGGGT GGCGATCGCC GGCACCCCCG TCCGCGACCC CGCTTATCAC
GCCTCCCCGG GCGAGACGAT CACAATCGAC GTGCCGCCGC CGGTCCCGGC CGAGCCGGCC
GGCGAGGCGA TCGCGCTCGA CATCGTCTAC GAGGACGCCG ACATCATCGT GCTGAACAAG
CCGCGCGGGC TGGTGGTCCA CCCCGCCGCT GGGCACGAGA CCGGCACCCT GGTCAACGCC
CTGATCGCGC ATTGCGGGGC GTCGCTGTCC GGGATCGGCG GGGTGAGGCG GCCGGGGATC
GTGCACCGGC TGGATAAAGA TACCACCGGC CTGATGGTGG CGGCCAAGAA CGACAAAGCG
CACCAGTCCC TGAGCGCGCA ATTCGCCGAC CACGGCCGCA CCGGGGAACT GCGCCGCGGC
TACCTCGCCT TCGTCTGGGG GGTGCCGGGC CGCAAATACG GCACGATCGA CGCCCCGATC
GACCGCCACC CGCATGCGCG GGAGAAGATG GCGGTCCGCC AGGGCGGCCG GGAGGCGATT
ACCCATTGGG AGGTACTGGA GAACTTCGCC GGCAAGGACG GCAAGCCGGT CGCGGCGCTG
ATCGCCTGCC AGCTCGAGAC CGGCCGGACC CATCAGATCC GGGTCCACCT CGCCCATCTC
GGCCATCCCC TGCTCGGCGA CGACGTCTAC GGGCCGCACT TCAAGACCAA GGCCAACCAG
CTCGCCCCGG CGGGGCGCGC CGCGTTGGCA GGGCTCGGAC GGCAGGCGCT GCACGCGTAT
TTGCTGACGC TGGAGCACCC CTCGACCGGC GAGGTGCTGA CCTGGGAATC ACCCCTGCCG
GCCGATCTGG CCCATCTTCA GGCCGCGCTG ACGGCGACGG AATGA
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| Protein sequence | MGETPENPVN VVVAGDEGSQ RLDRVLAARC PELSRSRLKA LILDGRVAIA GTPVRDPAYH
ASPGETITID VPPPVPAEPA GEAIALDIVY EDADIIVLNK PRGLVVHPAA GHETGTLVNA
LIAHCGASLS GIGGVRRPGI VHRLDKDTTG LMVAAKNDKA HQSLSAQFAD HGRTGELRRG
YLAFVWGVPG RKYGTIDAPI DRHPHAREKM AVRQGGREAI THWEVLENFA GKDGKPVAAL
IACQLETGRT HQIRVHLAHL GHPLLGDDVY GPHFKTKANQ LAPAGRAALA GLGRQALHAY
LLTLEHPSTG EVLTWESPLP ADLAHLQAAL TATE
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