| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0361 |
|---|
| Symbol | |
|---|
| ID | 6408007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 381746 |
|---|
| End bp | 382447 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642710271 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_001989397 |
|---|
| Protein GI | 192288792 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.324623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACAA TCGCTTTGGT CGACGACGAC CGCAACATTC TGACTTCGGT CTCGATCGCG
CTGGAAGCCG AAGGCTACCG GATCATGACC TACACCGACG GCGCCTCGGC GCTCGACGGC
TTCCGGACCA CGCCGCCCGA CCTCGCCATC CTCGACATCA AGATGCCGCG GATGGACGGC
ATGGAGACGC TGCGTCGGCT GCGCCAGAAG TCCGATCTGC CGGTGATCTT CCTCACCTCG
AAGGACGAGG AGATCGACGA GCTGTTCGGC CTGAAGATGG GCGCCGACGA TTTCATCCGC
AAACCGTTCT CGCAGCGGCT GCTGGTGGAG CGCGTCAAGG CGGTGCTGCG GCGCTCGGCG
CCGAAGGACC CGGCTGCGGC TCCGAAGGAA AACGACGCCA AGGCGCTCGA CCGCGGCCCG
CTGCGGATGG ACCCGGAGCG CCATACCTGC ACCTGGAAGA ACGAGCCGGT GACCCTCACC
GTCACCGAAT TCCTGATCCT GCAGGCGCTC GCGACCCGGC CCGGCGTGGT GAAGAGCCGC
AATGCGCTGA TGGACGCCGC CTATGACGAT CAGGTCTATG TCGACGACCG CACCATCGAC
AGCCACATCA AACGGCTGCG CAAGAAGTTC AAGGCGGTCG ACGACGAGTT CGAGATGATC
GAGACGCTGT ACGGCGTCGG CTATCGCTTC AAGGAAATCT GA
|
|---|
| Protein sequence | MPTIALVDDD RNILTSVSIA LEAEGYRIMT YTDGASALDG FRTTPPDLAI LDIKMPRMDG
METLRRLRQK SDLPVIFLTS KDEEIDELFG LKMGADDFIR KPFSQRLLVE RVKAVLRRSA
PKDPAAAPKE NDAKALDRGP LRMDPERHTC TWKNEPVTLT VTEFLILQAL ATRPGVVKSR
NALMDAAYDD QVYVDDRTID SHIKRLRKKF KAVDDEFEMI ETLYGVGYRF KEI
|
|---|
| |