Gene Rpal_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0358 
Symbol 
ID6408004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp378785 
End bp379186 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content62% 
IMG OID642710268 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_001989394 
Protein GI192288789 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGTC TGGTACTTGT GACCCACGGG CGCCTTGCCG ACGAGTTCAA GGCAGCGCTG 
GAACACGTGA TGGGGCCACA GCAACAAATC GAAGCCGTCA CGATTGGCGC CGAAGACGAC 
GCCGATCTGT GCCGCAGTGA CATCATCGAG GCGGTCAACC GCGTCGACAG CGGCGAGGGC 
GTGGCGATCC TGACCGACAT GTTCGGGGGC ACGCCGTCCA ACCTGGCGAT TTCCTGCATG 
AGCCGGCCGA AAGTCGAAGT GCTCGCGGGC ATTAATTTGC CCATGCTGGT GAAGCTCGCC 
AAAGTCCGCG AGGAACGCTC GCTGCCGGAG GCGATTGCGC TGGCCCAGGA GGCCGGACGC 
AAATATGTCA CCATCGCCAG TCGGGTATTG GCCGGTAAAT GA
 
Protein sequence
MIGLVLVTHG RLADEFKAAL EHVMGPQQQI EAVTIGAEDD ADLCRSDIIE AVNRVDSGEG 
VAILTDMFGG TPSNLAISCM SRPKVEVLAG INLPMLVKLA KVREERSLPE AIALAQEAGR 
KYVTIASRVL AGK