| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0347 |
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| Symbol | |
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| ID | 6407993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 365195 |
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| End bp | 366760 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710257 |
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| Product | peptidase S10 serine carboxypeptidase |
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| Protein accession | YP_001989383 |
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| Protein GI | 192288778 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.272983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTGT CGCCCCGGTC CGCCGTGACC GCCTCGATGT TGATCGCAGC GCTGGCGCTG
CCGCAGTTCG GCTCGAGCGC TGTCGCCCAA GAGGCGCGAC CCGCGGCACC ACACGCCGAG
CGTGCCAAGC CGAATGCAGA GCAGGCAGAC GCAGTCGCGA GTAAAGCCGA GGCCTCTCCG
GCCCGTGCAG AGCTCAACAG CCTGCCGCCG GACGTCACCA CCAAGCACAG TCTGGCGTTG
CCGGGGCGAA CTCTCGCGTT CACCGCCACC GCCGGCTCGA TCCGGCTGTT CAACGGCAAG
GGCGAACCGC AGGCCGATGT TGCCATCACC ACCTACAAGC TCGACGGCGC CGATGCACGA
ACCCGGCCGG TGACTTTCCT GTTCAACGGC GGCCCCGGCG CATCCTCGGC CTGGCTGCAG
CTCGGCGCCG CCGGACCGTG GCGGCTGCCG ATCGGCAACA GCGTGGTGGC GTCTTCGCCG
CCGGTGCTGC AGGCCAATGC AGAGACCTGG CTCGATTTCA CCGACCTGGT GTTCATCGAT
CCGGTCGGCA CCGGCTACAG CCGTTTCGTC GCCAGCGGCG ACGAGGTCCG CAAGCATTTC
TATGCGGTCG AGGGTGACAT CTCGGCGATG GCGGTGGTGA TCCGGCGTTG GCTCGAGAAG
AACGACCGGC TCGTTTCGCC GAAGTATCTA GCCGGTGAAA GTTACGGCGG CATCCGCGGA
CCGAAGGTCG TGGACAATCT GCAGACCAAG CAGGGCGTCG GCGTCAATGG TCTGATCCTG
GTGTCGCCGG TGCTCGACTT CCGCGATCTG TCCGGCTCCA GCCTGCTGCA ATATGCGGCG
CGGCTGCCGT CGATGACCGC GGTGGCGCGG CAGCAGAAGG GCAAGGTGAA CCGCGCCGAC
CTCGCCGACG TCGAAAGCTA CGCGCGCAGT GAATTCCTCA CCGATCTGGT CAAAGGCGAG
GCCGACAAGG AAGCCACCAC GCGGCTTGCC GACCGCGTCT CCGCGCTCAC CGGGATCGAC
AAGACCGTGA GCCGGCGGCT CGCCGGACGG TTCGACACCC GCGAATTCCA GCGTGAATTC
GACCGCGATC GCGGCCGGGT CACCGGACGG TTCGACGGCG CCAAGCTAGG GCTCGATCCG
TTCCCGGATT CCAGCGCTGC GCATTTCGGC GATCCGTCGG CGGATTCACT GATCGCGCCG
CTGACAAGTG CTGCCGTGCA GCTGACCCGC TCCACGCTGA ACTGGAAACC GGACGGATCG
TACGAACTGT TGAACAGCTC GGTCGCCGAG CAATGGGATT TCGGCCGTGG CCGGCAGCCG
CTGGAATCGA CCACGCAGCT GCGCGAGATC CTCAGCGTCG ATCCGAGCCT GCAGGTGCTG
GTCACCGGCG GGTTGTTCGA TCTCGCCGCG CCGTATTTCG GCACCCAGAT GGTGCTCGAT
CAGCTGCCGC CGACGCTGGC GGAAAAACGC GTGAAGTTCG TCGTCTATCC CGGCGGCCAC
ATGTTCTACG CCGAGGACGC TGCCCGGCAA TCGCTGCATG ACGAAGTGAA GGCGATGATG
AAGTAG
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| Protein sequence | MPLSPRSAVT ASMLIAALAL PQFGSSAVAQ EARPAAPHAE RAKPNAEQAD AVASKAEASP
ARAELNSLPP DVTTKHSLAL PGRTLAFTAT AGSIRLFNGK GEPQADVAIT TYKLDGADAR
TRPVTFLFNG GPGASSAWLQ LGAAGPWRLP IGNSVVASSP PVLQANAETW LDFTDLVFID
PVGTGYSRFV ASGDEVRKHF YAVEGDISAM AVVIRRWLEK NDRLVSPKYL AGESYGGIRG
PKVVDNLQTK QGVGVNGLIL VSPVLDFRDL SGSSLLQYAA RLPSMTAVAR QQKGKVNRAD
LADVESYARS EFLTDLVKGE ADKEATTRLA DRVSALTGID KTVSRRLAGR FDTREFQREF
DRDRGRVTGR FDGAKLGLDP FPDSSAAHFG DPSADSLIAP LTSAAVQLTR STLNWKPDGS
YELLNSSVAE QWDFGRGRQP LESTTQLREI LSVDPSLQVL VTGGLFDLAA PYFGTQMVLD
QLPPTLAEKR VKFVVYPGGH MFYAEDAARQ SLHDEVKAMM K
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