| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0346 |
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| Symbol | |
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| ID | 6407992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 364294 |
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| End bp | 365079 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710256 |
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| Product | endonuclease III |
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| Protein accession | YP_001989382 |
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| Protein GI | 192288777 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0360921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGAAAA CCACTCGCCG CCCTGCTAGG CCGGCCGCCA AGACGCCAGC AGCCTCGCCT
GCCAAACCCG CTAAGCGCAC CGCGGGCGCC AAGCCGAAAT CAGTGTCGGC CAAATCGGCG
CCGTCTCGCC GGGGTAAGTC GCCGCGGCGC TGGAGCGCGG CCGAAGTCCA AGAGGCTTTC
AGCCGCTTTG CCAAGGCGAA CCCAGAGCCG AAGGGCGAAC TCGAACATCT CAACCCGTTC
ACGCTTCTGG TCGCAGTGGT GCTGTCGGCG CAGGCGACCG ATGCCGGCGT CAACAAAGCG
ACGCGGCCGC TGTTTGCGGT CGCCGACACG CCGCAGAAGA TGCTGGCGCT CGGTGAGGAC
CGCGTGCGCG AGTACATCAA GACCATCGGC CTTTTTCGCA CCAAGGCGAA GAACGTGATT
GCGCTGTCGC AAAAGCTGAT CACCGACTTT GGCGGTGAGG TCCCGAATAC GCGCGAGGCG
CTCGAGACGC TCCCCGGCGC CGGCCGAAAG ACCGCCAATG TGGTGTTGAA CATGGCGTTC
GGTCAGCCGA CCATGGCGGT CGATACCCAT GTGTTCCGGG TTGGTAATCG CACCGGGCTG
GCGCCGGGCG ACACGCCACT CGCGGTGGAG CTCGAACTCG AGCGAGTGAT CCCGGCCGAG
TTCATGCAGC ACGCCCACCA CTGGTTGATC CTGCACGGCC GCTACACTTG CCTCGCCCGG
AAGCCACGTT GCGAGGTCTG CCTGATCAAC GATCTGTGCC GCTGGCCCGA GAAGACGGTG
AGTTAG
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| Protein sequence | MPKTTRRPAR PAAKTPAASP AKPAKRTAGA KPKSVSAKSA PSRRGKSPRR WSAAEVQEAF
SRFAKANPEP KGELEHLNPF TLLVAVVLSA QATDAGVNKA TRPLFAVADT PQKMLALGED
RVREYIKTIG LFRTKAKNVI ALSQKLITDF GGEVPNTREA LETLPGAGRK TANVVLNMAF
GQPTMAVDTH VFRVGNRTGL APGDTPLAVE LELERVIPAE FMQHAHHWLI LHGRYTCLAR
KPRCEVCLIN DLCRWPEKTV S
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