Gene Rpal_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0344 
Symbol 
ID6407990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp362809 
End bp363741 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID642710254 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001989380 
Protein GI192288775 
COG category[F] Nucleotide transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase
[COG2169] Adenosine deaminase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.251255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGCGC GCGCCGCGGC GGATAACATC AGCGGTATGA TGAACCTTGC CATTGCCGAC 
CACCAGCTCA TCAAACCCGG CGCCCGCGAT TCCGCGTTGG CCGACTACGA CTGCGTGCGG 
CGCGCCATCG CCTTCATCTC GCAGAAATGG AAGGCGCAGC CGACCATCGA GGCGATCGCC 
GACGCCGCCG GCCTGACGCC CGACGAGCTG CACCATCTGT TCCGGCGCTG GGCGGGGCTG 
ACGCCGAAGG CGTTCATGCA GGCGCTGACG CTCGACCACG CCAAATCGCT GCTGCGGGAT 
TCCGCCAGCG TGCTCGATGC CGCGCTGGCC TCCGGGCTGT CCGGCCCCGG CCGACTGCAC 
GATCTGTTCG TCACCCACGA GGCGATGTCG CCGGGCGAAT GGAAGAGCGG CGGCGCCGGG 
CTCAGCCTGC GCTACGGCTT TCATCCGTCG CCGTTCGGCA CCGCGGTGAT CATCGCCTCC 
GATCGCGGCC TTGCCGGTCT CGCCTTCGCC GACCCGGACG AGGAGCAGGC GGCGCTGGTC 
GATCTGCAAC AGCGCTGGCC GCGCGCGGTG TGCACGCAGG ATCAGGACGC GACTGCTCCG 
TTGGCGCGGC GGATCTTCGA TCCGGCACAA TGGCGTGCCG AGCAGCCGCT GCGGGTGGTG 
CTGATCGGCA CCGATTTCGA AGTGCGGGTG TGGGAGACGC TGCTGAAGAT CCCGCTCGGC 
AAGGCGGTTT GCTACTCGGA CATCGCCGCT AAGATCAGCC TACCGAAAGC CTCGCGCGCG 
GTCGGCGCCG CGGTCGGCAA GAACCCGATC TCGTTCGTGG TGCCGTGCCA TCGCGCGCTT 
GGCAAAGGCG GCGCACTCAC CGGCTATCAC TGGGGCCTGA CCCGCAAGCA GGCGATGATC 
GGCTGGGAAG CCGGGCAACT CAGGGCAGAG TGA
 
Protein sequence
MAARAAADNI SGMMNLAIAD HQLIKPGARD SALADYDCVR RAIAFISQKW KAQPTIEAIA 
DAAGLTPDEL HHLFRRWAGL TPKAFMQALT LDHAKSLLRD SASVLDAALA SGLSGPGRLH 
DLFVTHEAMS PGEWKSGGAG LSLRYGFHPS PFGTAVIIAS DRGLAGLAFA DPDEEQAALV 
DLQQRWPRAV CTQDQDATAP LARRIFDPAQ WRAEQPLRVV LIGTDFEVRV WETLLKIPLG 
KAVCYSDIAA KISLPKASRA VGAAVGKNPI SFVVPCHRAL GKGGALTGYH WGLTRKQAMI 
GWEAGQLRAE