Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0341 |
Symbol | |
ID | 6407987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 359903 |
End bp | 360211 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642710251 |
Product | protein of unknown function DUF1330 |
Protein accession | YP_001989377 |
Protein GI | 192288772 |
COG category | [S] Function unknown |
COG ID | [COG5470] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00521106 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAGG GCTATTGGGT GGGGCGGATC GACGTGCATG ATCTCGACGG CTACAAGCGC GACTACGTCG CCCACAACGG CGCGGTATTC GCCAAATACG GCGCCAAGTT TCTGACCCGC GGCGGCACTT ACGAGGCCAA AGAGGGACAG GCGCGATCGC GTAACGTGGT GATCGAGTTC AAGGACTACG AGACTGCGCT AGCCTGCTAC CATTCGCCGG AGTATCAGGC GCTGATCAAG GCGCGGGCGC CGTTCTCCGA AGGTGAAATG GTGGTCGTCG AGGGTTACGA CGGTCCGCAG CCGTCCTGA
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Protein sequence | MPKGYWVGRI DVHDLDGYKR DYVAHNGAVF AKYGAKFLTR GGTYEAKEGQ ARSRNVVIEF KDYETALACY HSPEYQALIK ARAPFSEGEM VVVEGYDGPQ PS
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