Gene Rpal_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0339 
Symbol 
ID6407985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp358575 
End bp359156 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content65% 
IMG OID642710249 
ProductNADPH-dependent FMN reductase 
Protein accessionYP_001989375 
Protein GI192288770 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0468991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCGG TCAAGATCCT GATCATTCCC GGCTCGCTGC GCACCGGCTC GCACAATGTG 
CGGCTGGCGG CCACCGCTGC GCATGAATTC GCTCGGGCCG ATATCGACAC CACCTGGCTG 
TCGCTCGCCG ATTATGCGCT GCCGATCTAC GATGCGGACT TCGAGGCCAA ATCCGGCGTT 
CCGAAAAACG CCGTCGGCCT GAAGCGAATG ATCGGCGCGC ATCATGGCGT GCTGATCGTC 
AGCCCCGAAT ACAATTCGGC GCCGCCGCCG CTGCTGAAGA ACGCGATCGA CTGGGTGTCG 
CGGGTCGAGG ATCCGCACGA GACCCAGGGC CAAGTGTTTC GCGACCGAGT CTTCGCGCTC 
GCCGCAGCGT CCGAAGGCAA GCTCGGCGGT GCGCGATGCC TTGCCGCGCT GCGGCTGATC 
CTGAGCGGCT GCCGCGCGCC GGTGATTCCC AACCAGCTCG CGCTGTCGTT CGCCCACGAG 
GCCTATGACG ACAACGACCG GCTCAAACAC CCCGCCGACG CCACCGCGCT GCAGGCGATG 
GTGCGGCAAT TGATCGATTT CGCTCAGCAG ATGATGAGGT AA
 
Protein sequence
MSAVKILIIP GSLRTGSHNV RLAATAAHEF ARADIDTTWL SLADYALPIY DADFEAKSGV 
PKNAVGLKRM IGAHHGVLIV SPEYNSAPPP LLKNAIDWVS RVEDPHETQG QVFRDRVFAL 
AAASEGKLGG ARCLAALRLI LSGCRAPVIP NQLALSFAHE AYDDNDRLKH PADATALQAM 
VRQLIDFAQQ MMR