Gene Rpal_0336 details

Gene Information

• Locus tag: Rpal_0336
• Symbol: dnaK
• ID: 6407982
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 354525
• End bp: 356420
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642710246
• Product: molecular chaperone DnaK
• Protein accession: YP_001989372
• Protein GI: 192288767
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0107713
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAGG TCATTGGTAT CGACCTCGGC ACCACGAATT CGTGCGTCGC CGTAATGGAT 
GGTAAGTCTG CCAAAGTCAT CGAGAACGCC GAGGGTATGC GCACGACCCC GTCGATCGTC 
GCGATCACCG ACGACGGTGA GCGTCTGGTC GGCCAGCCGG CGAAGCGTCA GGCTGTCACC 
AATCCCGAGC GCACCTTCTT CGCAGTCAAG CGCCTGATCG GCCGCCGCTA CGACGACCCG 
ATGGTCGAGA AGGACAAGGG TCTCGTCCCC TACAAGATCG TCAAGGCTTC CAACGGCGAC 
GCGTGGGTCG AAGCCGACGG CAAGACCTAT TCGCCCTCGC AGGTCTCGGC CTTCATTCTG 
CAGAAGATGA AGGAGACCGC GGAAGCGCAT CTCGGCCAGA AGGTCGATCA GGCCGTCATC 
ACCGTTCCGG CGTACTTCAA CGACGCCCAG CGCCAGGCCA CCAAGGACGC CGGCAAGATC 
GCCGGTCTCG AGGTCCTGCG CATCATCAAT GAGCCGACCG CGGCCGCGCT GGCCTACGGT 
CTCGATAAGG CCAAGACCGG CACCATCGCG GTGTACGACC TCGGCGGCGG CACCTTCGAC 
GTCTCGATCC TGGAGATCGG CGACGGCGTG TTCGAGGTGA AGTCGACCAA CGGCGACACC 
TTCCTCGGCG GTGAAGACTT CGACATGCGT CTGGTCAACT ACCTCGCCGA CGAATTCCAG 
AAGGAGCAGG GCATCGACCT GCGCAAGGAC AAGCTTGCGC TGCAGCGCCT GAAGGAAGCC 
GCCGAAAAGG CCAAGATCGA GCTGTCGTCG ACGACGCAGA CCGAGATCAA CCTGCCGTTC 
ATCACCGCGG ACCAGTCCGG TCCGAAGCAT CTGACCATGA AGCTGACCCG CGCCAAGTTC 
GAAGCGTTGG TCGACGACCT GGTGCAGAAG ACCATCGAGC CGTGCCGCAA GGCCCTGAAG 
GATGCCGGCC TCACCGCCGG TGAGATCAGC GAAGTGGTGC TGGTCGGCGG CATGACCCGC 
ATGCCGAAGG TCCAGGAAGT GGTGAAGCAG CTGTTCGGCA AGGAGCCGCA CAAGGGCGTC 
AACCCGGACG AAGTCGTGGC GATCGGCGCG GCGATCCAGG CCGGCGTGCT GCAGGGCGAC 
GTCAAGGACG TGCTGCTGCT CGACGTGACC CCGCTGTCGC TGGGCATCGA GACGCTGGGT 
GGCGTGTTCA CCCGCATCAT CGATCGCAAC ACCACTATCC CGACCAAGAA GAGCCAGGTG 
TTCTCGACCG CCGAAGACAA TCAGAACGCG GTCACCATCC GGGTCTTCCA GGGCGAGCGC 
GAAATGGCGG CCGACAACAA GATGCTCGGT CAGTTCGACC TGATGGGCAT TCCGCCGGCC 
CCGCGCGGCA TGCCGCAGAT CGAAGTGACC TTCGACATCG ACGCCAACGG CATCGTCAAC 
GTCTCGGCCA AGGACAAGGC GACCGGTAAG GAGCAGCAGA TCCGCATCCA GGCTTCTGGT 
GGTCTGTCCG ACTCCGAGAT CGACAAGATG GTCAAGGACG CCGAAGCCAA CGCGGCCGAA 
GACAAGAAGC GCCGCGAGGC GGTCGACGCC AAGAACCACG CCGACGCGCT GGTACATTCC 
ACCGAGAAGG CGCTGGCCGA GCACGGTTCG AAGGTCGACG AAAGCGAGCG CCGCAGCATC 
GAAGACGCGC TGAGCGATCT GCGCGAAGCG CTGAAGGGCG ACGACGCCGA GGCGATCAAG 
GCCAAGAGCA ACACGCTGGC GCAGGCTTCG ATGAAGCTCG GCGAAGCGAT GTACAAGCAG 
GCAGAAGCCG CCGGCGGTGC GCAGCAGGCC GGTAAGGACG ACGTGGTCGA CGCCGAGTTC 
ACCGAAGTCG ACGACGACAA GAAGAAGTCG GCGTAA 

 

Protein sequence

MGKVIGIDLG TTNSCVAVMD GKSAKVIENA EGMRTTPSIV AITDDGERLV GQPAKRQAVT 
NPERTFFAVK RLIGRRYDDP MVEKDKGLVP YKIVKASNGD AWVEADGKTY SPSQVSAFIL 
QKMKETAEAH LGQKVDQAVI TVPAYFNDAQ RQATKDAGKI AGLEVLRIIN EPTAAALAYG 
LDKAKTGTIA VYDLGGGTFD VSILEIGDGV FEVKSTNGDT FLGGEDFDMR LVNYLADEFQ 
KEQGIDLRKD KLALQRLKEA AEKAKIELSS TTQTEINLPF ITADQSGPKH LTMKLTRAKF 
EALVDDLVQK TIEPCRKALK DAGLTAGEIS EVVLVGGMTR MPKVQEVVKQ LFGKEPHKGV 
NPDEVVAIGA AIQAGVLQGD VKDVLLLDVT PLSLGIETLG GVFTRIIDRN TTIPTKKSQV 
FSTAEDNQNA VTIRVFQGER EMAADNKMLG QFDLMGIPPA PRGMPQIEVT FDIDANGIVN 
VSAKDKATGK EQQIRIQASG GLSDSEIDKM VKDAEANAAE DKKRREAVDA KNHADALVHS 
TEKALAEHGS KVDESERRSI EDALSDLREA LKGDDAEAIK AKSNTLAQAS MKLGEAMYKQ 
AEAAGGAQQA GKDDVVDAEF TEVDDDKKKS A