| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0314 |
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| Symbol | |
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| ID | 6407960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 334301 |
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| End bp | 335038 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642710224 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001989350 |
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| Protein GI | 192288745 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTCTCT TCCCCGCGAT CGATCTCAAG AACGGCCAGT GCGTGCGGCT CGAACAGGGC
GACATGGCGC GCGCCACGGT GTTCAACCTC GATCCCGCCG CGCAGGCGCA GAGCTTTGCG
GCGCAGGGCT TCCAGTACCT GCACGTCGTC GATCTCGACG GCGCCTTCGC CGGCAAGCCG
ATGAACGCCC AGGCGGTCGA GGCGATGCTG AAGGTGGTGT CGATGCCGGT GCAGCTCGGC
GGCGGCATCC GCGACCTCAA GACGATCGAA GCCTGGCTGT CCAAGGGCAT CGCCAGGGTC
ATCATCGGCA CCGCCGCGGT GCGAGATCCG GCGCTGGTGA AGGAAGCCGC CAAGGCCTTC
CCTGGCCGCG TCGCCGTCGG CCTCGACGCC CGCGACGGCA ACGTCGCGGT CGAGGGCTGG
GCCGAGAGCT CGCAGGTCAC CGCGCTCGAC ATTGCGCAGC GGTTCGAAGA CGCCGGTGTA
GCCGCGATCA TCTTCACCGA CATCGCCCGT GACGGGCTGC TCAAGGGCAT CAACTGGGAC
GCGACCATCG CGCTGGCCGA GGCGATTTCG ATTCCGGTGA TCGCCTCCGG CGGCCTCGCC
TCGATCGAAG ACGTCAGGAC GCTGCTCAGC CCGCGCGCCA AAAAGCTCGA AGGCGCGATC
GCCGGGCGGG CGCTGTACGA CGGCCGGCTC GATCCCACTG AGGCGCTGGC GCTGATCGGC
GCCGCCAAGG CGGCCTAA
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| Protein sequence | MILFPAIDLK NGQCVRLEQG DMARATVFNL DPAAQAQSFA AQGFQYLHVV DLDGAFAGKP
MNAQAVEAML KVVSMPVQLG GGIRDLKTIE AWLSKGIARV IIGTAAVRDP ALVKEAAKAF
PGRVAVGLDA RDGNVAVEGW AESSQVTALD IAQRFEDAGV AAIIFTDIAR DGLLKGINWD
ATIALAEAIS IPVIASGGLA SIEDVRTLLS PRAKKLEGAI AGRALYDGRL DPTEALALIG
AAKAA
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