Gene Rpal_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0307 
Symbol 
ID6407953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp328886 
End bp329470 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content69% 
IMG OID642710217 
ProductSmr protein/MutS2 
Protein accessionYP_001989343 
Protein GI192288738 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTA TCATTCCGCC GCTCGACCCG CCGATGTCGC GCCGCAAGCG CAGCTTGACC 
GAGGATGAGC GGGCGCTGTG GGACGGTGTG GCGCGACAGA TCAAGCCGCT GCGCGGCCGG
CCGCGGCTGA TCAAGGTCGA GATTGCCGAT CCGCAGGCCC TCGTGCCGGC CATCAAGCCG
GCGCCGGTGG CGCCGCCGCA ACCGCTCAAG CGTACCGCGA AACCATCGCT CCCAACCGCC
CCGCCGCCGC TCACCCCGCT GGGCCGGCGC GAGCGGGCGC ATCTGTCGCG TGGCCGCAAG
GACATCGACG CGCGGATCGA TCTGCATGGG ATGACCCAGG CCCGTGCCCA TCATGCCCTG
CTGTATTTCC TGCAGCGCGC CAGTCACGAC GGGCTCGGCT TCGTGCTGGT GATTACCGGC
AAGGGCAAGA GCGGCGACAC CGAACGCGGC GTGCTCCGCC GCCAGGTGCC GCAGTGGCTC
GCCCTTCCCG AATTCCGCGC CTATGTGGTC GGTTTCGACG AAGCCCATAT CGGTCACGGC
GGCGAAGGCG CATTGTACGT GCGGGTGAGG CGAGCACGCG GTTAG
 
Protein sequence
MKRIIPPLDP PMSRRKRSLT EDERALWDGV ARQIKPLRGR PRLIKVEIAD PQALVPAIKP 
APVAPPQPLK RTAKPSLPTA PPPLTPLGRR ERAHLSRGRK DIDARIDLHG MTQARAHHAL
LYFLQRASHD GLGFVLVITG KGKSGDTERG VLRRQVPQWL ALPEFRAYVV GFDEAHIGHG
GEGALYVRVR RARG