Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0303 |
Symbol | |
ID | 6407949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 324987 |
End bp | 325685 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642710213 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_001989339 |
Protein GI | 192288734 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGAGA TCGTCCTCGA TACCGAAACC ACCGGCCTCG ATCCGCTGCG CGGCGATAGG CTGGTCGAAA TCGGCTGCGT CGAGATCTTC AACCGGATGC CGACCGGCCG CACCTATCAT CAATACCTCA ATCCCGAACG GGACATGCCG GCTGAAGCCT TTGCGGTGCA TGGGCTGTCG AGCGAATTCC TCGCCGACAA GCCGCTGTTC GCACATGTGG CGGACGAGTT TCTCGAATTC ATCGGTGATG CGCCGCTGGT GATTCACAAC GCATCGTTCG ACATCGGCTT CATCAATGCG GAGTTGTCGC GGCTGTCGCG CGCGCCGGTG CCACGCGATC GCCTGGTCGA CACGCTGCTG CTCGCCCGCC GTAAGCATCC GGGCGTGTCG AACCGGCTCG ACGATCTTTG CTCGCGTTAC GCGATCGACA ATTCGCGCCG GACCAAGCAC GGCGCGCTGC TCGACGCCGA GCTGTTGGCC GAGGTCTATA TCGACCTGAT CGGCGCCCGG CAGTCGCAGC TCATTCTGGC TGACGTGCCG GCCGAGGTGG TCGGAGCTGC CAGCGAGAAC CGTCGCCGCC AGCGACCCGC GCCGCTGCCG AACCGGCTGA CCGAGGCTGA CCTCGAAGCC CACCGCGCCT TCATCGCCAC CATGGGCGAG AAGGCGATCT GGCCAGACTA TCTGCCCGCC GGCGCCTGA
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Protein sequence | MREIVLDTET TGLDPLRGDR LVEIGCVEIF NRMPTGRTYH QYLNPERDMP AEAFAVHGLS SEFLADKPLF AHVADEFLEF IGDAPLVIHN ASFDIGFINA ELSRLSRAPV PRDRLVDTLL LARRKHPGVS NRLDDLCSRY AIDNSRRTKH GALLDAELLA EVYIDLIGAR QSQLILADVP AEVVGAASEN RRRQRPAPLP NRLTEADLEA HRAFIATMGE KAIWPDYLPA GA
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