Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0298 |
Symbol | rho |
ID | 6407944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 320391 |
End bp | 321656 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642710208 |
Product | transcription termination factor Rho |
Protein accession | YP_001989334 |
Protein GI | 192288729 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGAAA TCAAACTTCA AGACCTGAAG GCCAAGACGC CGGCCGAACT CGTTTCGTTT TCGGAAGAGC TCGGGGTCGA GAACGCCAGC ACGATGCGCA AGCAGGAGCT GATGTTCGCC TGCCTCAAGC AGTTGTCGGC CAAAGAGACC GACATCATCG GCGAAGGCGT CGTCGAGGTG CTGTCCGACG GTTTTGGCTT CTTGCGCTCG CCGGATGCCA ACTACCTTCC CGGTCCGGAC GACATTTACG TTTCGCCCTC GCAGATCCGC CGCTTCGGCC TGCGCACCGG TGACACCATC GAAGGCCACA TCCGCAGCCC GAAGGAAGGC GAACGCTACT TCGCGCTGCT CAAGGTCAAC TCGCTGAACT TCGAGGATCC CGAGAAGTCG AAGCACAAGG TCAATTTCGA CAACCTGACG CCGCTGTTTC CGGATGAACG CTTCCGGCTC GAGATCGACG ATCCCACCCG CAAGGATCTG TCGGCCCGCG TCATCGACAT CGTCGCCCCG ATCGGTAAGG GCCAGCGCGC TCTGATCGTC GCGCCGCCGC GCACCGGTAA GACCGTGCTG ATGCAGAACA TCGCACACTC GATCACGGCG AATCACCCAG AGTGCTATCT GATCGTGCTG CTGATCGACG AGCGGCCCGA AGAAGTCACC GACATGCAGC GCTCGGTGAA GGGTGAGGTG ATTTCCTCGA CCTTCGACGA ACCGGCGGTT CGCCACGTCC AGGTCGCCGA GATGGTGATC GAAAAGGCCA AGCGCCTGGT CGAACACGGC CGCGACGTCG TCATCTTGCT CGACTCGATC ACCCGCCTCG GCCGCGCCTA CAACACGGTG GTGCCGTCTT CGGGTAAGGT GCTGACCGGC GGTGTCGACG CCAACGCGCT GCAGCGGCCG AAGCGATTCT TCGGCGCCGC CCGTAACATC GAAGAGGGTG GGTCGCTTAC CATCATCGCC ACTGCGCTGG TCGACACCGG CTCCCGCATG GACGAAGTCA TCTTCGAAGA GTTCAAGGGC ACCGGCAACT CGGAGTTGAT CCTCGACCGC AAGGTTGCCG ACAAGCGCAC CTTCCCGGCG ATCGACATCT CGCGGTCCGG CACCCGCAAG GAAGAGCTGA TCACCGACCC GCAGCTCTTG AAGAAGATGT ACGTGCTGCG CCGTATCCTC AACCCGATGG GGACAATGGA CGCGATCGAG TTCCTGCTCG ACAAGCTGCG CAACACCAAG AACAATTCAG AGTTCTTCGA CTCGATGAAC ACCTGA
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Protein sequence | MREIKLQDLK AKTPAELVSF SEELGVENAS TMRKQELMFA CLKQLSAKET DIIGEGVVEV LSDGFGFLRS PDANYLPGPD DIYVSPSQIR RFGLRTGDTI EGHIRSPKEG ERYFALLKVN SLNFEDPEKS KHKVNFDNLT PLFPDERFRL EIDDPTRKDL SARVIDIVAP IGKGQRALIV APPRTGKTVL MQNIAHSITA NHPECYLIVL LIDERPEEVT DMQRSVKGEV ISSTFDEPAV RHVQVAEMVI EKAKRLVEHG RDVVILLDSI TRLGRAYNTV VPSSGKVLTG GVDANALQRP KRFFGAARNI EEGGSLTIIA TALVDTGSRM DEVIFEEFKG TGNSELILDR KVADKRTFPA IDISRSGTRK EELITDPQLL KKMYVLRRIL NPMGTMDAIE FLLDKLRNTK NNSEFFDSMN T
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