Gene Rpal_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0287 
Symbol 
ID6407933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp306271 
End bp306834 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content68% 
IMG OID642710197 
Producthypothetical protein 
Protein accessionYP_001989323 
Protein GI192288718 
COG category[S] Function unknown 
COG ID[COG3786] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TAACCAAATC AGCCCCTTCA GAGAAATCGC CAAGGCCGCT TGCCCGGGTG 
CAGGTGGGCG CGGCGGCCGG CCAGCGCAGC CGCGGCTGGC TGATCGCCGG CGGGCTGACC
ATCCCGGTGG CGCTGGGGCG CGGCGGCATC CTCGCCAACA AACGGGAAGG CGACGGCGGC
ACGCCGCGCG GCACGTTTCA CCCGCTACGG CTGTGGTGGC GCCCCGACCG CGGCCCCCGG
CCCCGGACAC ATCTGCCGAT CCGCATTATC GGCCCTGACG ATGCCTGGTG CGAAGACCCA
CAAAGCCGGC ACTATAACCA GCCGATCCAC CGGTCATCCG CCGGCGAAGG TGATCGGCTG
ATGCGCGACG ATCGCCTCTA CGACCTGATC GTCGAGATCG ACCACAACAC CCGGCCGCGG
ATTGCCGGCC GCGGCAGCGC CGTTTTTCTT CATCTGGCTC GGGACAATTT CGGCCCGACC
GCCGGCTGTG TGGCGATGAC TCGCGGCAAC CTGCAGCGTC TGCTGGCCAG AATCGGGCCA
CGGACGAAGA TCGTCATCGG TTAG
 
Protein sequence
MKKITKSAPS EKSPRPLARV QVGAAAGQRS RGWLIAGGLT IPVALGRGGI LANKREGDGG 
TPRGTFHPLR LWWRPDRGPR PRTHLPIRII GPDDAWCEDP QSRHYNQPIH RSSAGEGDRL
MRDDRLYDLI VEIDHNTRPR IAGRGSAVFL HLARDNFGPT AGCVAMTRGN LQRLLARIGP
RTKIVIG