| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0263 |
|---|
| Symbol | |
|---|
| ID | 6407908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 281011 |
|---|
| End bp | 282309 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642710172 |
|---|
| Product | RiBisCO-like protein |
|---|
| Protein accession | YP_001989299 |
|---|
| Protein GI | 192288694 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.724133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGG ACGACATCGC AGGCTTCTAC GCCAAGCGCG CAGATCTCGA CCTCGACAAT
TACATCGAGC TGGATTTCGA TTTCGAATGC GCCGGCGATC CGCGCGAAGC GGCGGCGCAT
CTGTGCAGCG AACAGTCGAC GGCGCAGTGG CGGCGGGTCG GCTTCGACGA AGACTTTCGT
CCGCGCTTCG CCGCCAAGGT GTTGGAGCTG TCGGCGGAGC CGCGCCCTTC GGGATTCAGC
GTTCCGGTCG AGTGCGCCGC GCGCGGCGAG GTGCATGCCT GCCGCGTCAC CATCGCGCAT
CCGCACGGCA ATTTCGGCGC GAAGATTCCG AACTTGCTGT CGGCCGTCTG CGGCGAGGGC
GTGTTCTTCT CGCCCGGCAT CCCGCTGATC CGGCTGCAGG ACATTCGGTT TCCAGAGCCG
TATCTCGCCG CGTTCGACGG CCCGCGCTTT GGCATCGCAG GCGTGCGCGA GCGGCTTCAG
GCGTTCGATC GCCCGATCTT CTTCGGGGTG ATCAAGCCGA ACATCGGCCT GCCGCCGCAG
CCGTTCGCCG AGCTCGGCTA TCAGAGCTGG ACCGGTGGCC TCGACATCGC CAAGGACGAC
GAGATGCTGG CGGATGTCGA TTGGTGTCCG CTGGCCGAGC GCGCCGCGCT GCTCGGCGAT
GCCTGCCGTC GTGCCTCAGC GGAAACTGGC GTACCGAAGA TCTATCTCGC CAATATCACC
GACGAGGTCG ACCGGCTGAC CGAGCTGCAC GACGTCGCTG TCGTCAATGG GGCCGGCGCG
CTGTTGATCA ATGCGATGCC GGTTGGGCTG TCCGCGGTGC GGATGCTGCG CAAGCACGCC
ACCGTTCCGC TGATCGCACA CTTCCCCTTT ATCGCCGCGT TCAGCCGGCT AGCGAATTAC
GGCATCCATT CGCGGGTGAT GACGCGGCTG CAGCGATTGG CGGGCTTCGA TGTCGTGATC
ATGCCGGGCT TCGGTCCGCG GATGATGACG CCGGAACACG AGGTGCTCGA CTGCATCCGC
GCCTGCCTGG AGCCGATGGG GTCGATCAAG CCGTGTCTGC CGGTGCCGGG CGGCAGCGAC
TCCGCGGCGA CGCTGGAGAA TGTGTATCGC AAGGTCGGCA GCGCCGATTT CGGCTTCGTG
CCCGGCCGCG GCGTGTTCGG TCATCCGATG GGGCCGGCCG CTGGCGCGAC TTCGATCCGG
CAGGCCTGGG ACGCGATTGC CGCGGGCATC CCGGTGGCCG ATCACGCCGC CAGCCATCCT
GAGTTGGCGG CAGCGCTGAA AGCTTTCGGC GGGCGCTGA
|
|---|
| Protein sequence | MTPDDIAGFY AKRADLDLDN YIELDFDFEC AGDPREAAAH LCSEQSTAQW RRVGFDEDFR
PRFAAKVLEL SAEPRPSGFS VPVECAARGE VHACRVTIAH PHGNFGAKIP NLLSAVCGEG
VFFSPGIPLI RLQDIRFPEP YLAAFDGPRF GIAGVRERLQ AFDRPIFFGV IKPNIGLPPQ
PFAELGYQSW TGGLDIAKDD EMLADVDWCP LAERAALLGD ACRRASAETG VPKIYLANIT
DEVDRLTELH DVAVVNGAGA LLINAMPVGL SAVRMLRKHA TVPLIAHFPF IAAFSRLANY
GIHSRVMTRL QRLAGFDVVI MPGFGPRMMT PEHEVLDCIR ACLEPMGSIK PCLPVPGGSD
SAATLENVYR KVGSADFGFV PGRGVFGHPM GPAAGATSIR QAWDAIAAGI PVADHAASHP
ELAAALKAFG GR
|
|---|
| |