| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0256 |
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| Symbol | |
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| ID | 6407900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 271388 |
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| End bp | 272479 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642710164 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_001989292 |
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| Protein GI | 192288687 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0712606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTAGTG AACAAGCCTT GCTGGTGCTG GGGATCGAGA CCACCTGCGA TGAAACCGCA
GCCGCCGTGG TCGAGCGTCG CGCCGACGGC AGCGGGCGCC TCCTCTCCAA TATCGTGCGT
TCCCAGACCG ATGAACACGC CCCCTTTGGT GGCGTCGTCC CGGAGATCGC CGCGCGCGCC
CATGTCGATG TGCTCGACGG CATTATCGCG GCGGCGATGA ACGAAGCCGG CGTGGCGTTC
GCCAGTCTGT CCGGGGTTGC GGCAGCCGCC GGGCCAGGGC TGATCGGTGG CGTGATCGTC
GGACTGACCA CCGCCAAGGC GATTGCGCTG GTGCACGGCA CACCGCTGAT CGCGGTCAAT
CACCTCGAAG CCCATGCGCT GACGCCGCGG CTGACCGACG CGGTCGAGTT TCCCTACTGT
CTGTTCCTCG CGTCCGGCGG CCACACCCAG ATCGTCGCGG TGCTCGGCGT CGGCAACTAC
GTCCGGCTCG GCACCACGGT CGACGACGCG ATCGGCGAGG CATTCGACAA GATCGCCAAG
ATGCTCGGCC TGCCCTACCC CGGCGGCCCT CAGGTCGAGC GCGCCGCCGA AGCCGGCGAT
CCCAACCGCT TCGCATTTCC CCGCCCGATG CTGGGGCGCC AGGATGCTAA TTTCTCTCTG
TCTGGGCTGA AGACTGCGGT CCGCAACGAG GCCGGTAAGC TGACGCCGCT CGATCCGCAG
GACATCAACG ATCTGTGCGC GGGCTTTCAG GCCGCGGTGC TGGAATCGGT GGCCGACCGG
CTCGGCGCCG GGCTGCGGCT GTTCAAGGAA CGGTTCGGGC CGCCGAAGGC GCTGGTCGCG
GCCGGCGGCG CCGCCGCCAA TCAGGCGATC CGCCGGATGC TGCGCGAAGT CGCCGCCAAG
GTGCAGACCA CGCTGATCGT GCCGCCGCCG TCGCTGTGCA CCGACAATGG CGCGATGATC
GCCTGGGCTG GAGCCGAGCG GCTGGCGCTC GGCCTCACCG ATACGATGGA TACCGCGCCG
CGCGCGCGTT GGCTGCTCGA CGCCAACGCC ACCGCACCGG CGAAATTTGC CAACACGCGT
GCCGGGTTCT AA
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| Protein sequence | MTSEQALLVL GIETTCDETA AAVVERRADG SGRLLSNIVR SQTDEHAPFG GVVPEIAARA
HVDVLDGIIA AAMNEAGVAF ASLSGVAAAA GPGLIGGVIV GLTTAKAIAL VHGTPLIAVN
HLEAHALTPR LTDAVEFPYC LFLASGGHTQ IVAVLGVGNY VRLGTTVDDA IGEAFDKIAK
MLGLPYPGGP QVERAAEAGD PNRFAFPRPM LGRQDANFSL SGLKTAVRNE AGKLTPLDPQ
DINDLCAGFQ AAVLESVADR LGAGLRLFKE RFGPPKALVA AGGAAANQAI RRMLREVAAK
VQTTLIVPPP SLCTDNGAMI AWAGAERLAL GLTDTMDTAP RARWLLDANA TAPAKFANTR
AGF
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