Gene Rpal_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0253 
Symbol 
ID6407897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp269099 
End bp269761 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID642710161 
Producthypothetical protein 
Protein accessionYP_001989289 
Protein GI192288684 
COG category[R] General function prediction only 
COG ID[COG3897] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0638202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCT CCACCATTAC CGATCCGATC GCCTTCATCC ACGCCAACAC CCGGCTGCGC 
GAGGTGCCGT TGGTGCCGGA GGTGATGCTG CACGTCGCCG ACGAGGCGCT GCCGTTGTGG 
AGCAAGACCG AAGAAGAGCT TGGCGAGGCC GGGCTGCCTC CGCCATTCTG GGCGTTCGCC 
TGGGCCGGCG GACAGGCGCT GGCGCGCTAT GTGCTGGATC ATCCGCAGGA CGTCGCCGGC 
AAAGAGGTGA TCGACCTGGC CTCCGGCTCC GGGCTGGTGG CGATCGCGGC GATGAAGGCC 
GGCGCGCGCA GCGTCACCGC GTTCGATATC GACGGCTTCG CGCGCGAGGC GATCCTGGTC 
AACGCTGCGG CCAACGGCGT CGCGATCGAT GTCTGCGGCG ACGATCTGCT TGCCGGGCCG 
CACCCGCTGC CCGCGCAGGC CGTGCTCGCG GGCGATATCT TCTATCAGCA GGACATCGCC 
GGGCTTGCGT TTGCGTTTCT GCAAAACCGT GTCGCGCAAG GCGCGCGGGT GCTGATCGGT 
GATCCGGGGC GTTACTATCT GCCGAAGGAC CAGCTCGTGC AGCTCGCGAG CTACGGCGTG 
CCGGTGACGC GCGAACTGGA AGATTCCGAA ATCAAACACA CCGGCGTGTG GATGCTAAAG 
TAA
 
Protein sequence
MSTSTITDPI AFIHANTRLR EVPLVPEVML HVADEALPLW SKTEEELGEA GLPPPFWAFA 
WAGGQALARY VLDHPQDVAG KEVIDLASGS GLVAIAAMKA GARSVTAFDI DGFAREAILV 
NAAANGVAID VCGDDLLAGP HPLPAQAVLA GDIFYQQDIA GLAFAFLQNR VAQGARVLIG 
DPGRYYLPKD QLVQLASYGV PVTRELEDSE IKHTGVWMLK