| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0252 |
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| Symbol | |
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| ID | 6407896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 267818 |
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| End bp | 269089 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710160 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_001989288 |
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| Protein GI | 192288683 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.136132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTCG AGGTCGTCAC TTTCGGCTGC CGCCTCAACG CGTTCGAGTC CGAGCTGATC
CGGCGCGAAG CGGAAAGCGC CGGCCTTGCT GACGCCATCG TGGTCAACAG CTGCGCGGTG
ACCAATGAGG CCGTGGCGCA GGCGCGGCAG CAGATCCGCA AGTTGAAGCG CGCCCGCCCC
GAAGCCCGGA TCATCGTCAC CGGCTGCGCG GCGCAGACCG AACCGGCGAC ATTCGCCGCG
ATGGCAGAGG TCGACCGCGT CATCGGCAAC GACGACAAGA CCCGCAGCGA TGCCTGGCAC
GCCGCCAAGG GTGCGCTCGA GGCCGGCGCC AGCTTCGGAC TCGACACCGA GCAGAAGATC
GCAGTCGCCG ACATCATGGC GGTGCGCGAA ATGGCGCCGC ATCTTCTGGA CGGTTACCAG
AGCGGGCTTC CTCGGGTGTT CGTGCAGGTG CAGAACGGCT GCGACCATCG CTGCACCTTC
TGCATCATCC CTTACGGCCG TGGTAACTCT CGCTCGGTGC CTGTGGGCGC GGTGGTCGAG
CAGGTGCGTC TATTGGCCGA GCGCGGCCAC GCCGAGATCG TGCTGACCGG CGTCGACCTC
ACCAGCTATG GCGCCGACCT GCCAGGCGCG CCGAAGCTCG GCACCCTGGT TAAGAAAGTG
TTACGGCACG TGCCGGAGCT GCAGCGGCTG CGGATCTCGT CGATCGATCA GGTCGAGGCC
GATCGCGACC TGATCGATGC GCTCGCCACC GAGCCGCGGC TGATGCCGCA TCTGCACCTG
TCGCTGCAGG CCGGCGATGA TCTGATCCTC AAACGGATGA AGCGCCGGCA TGCGCGGGCC
GATGCGATCG CGTTCTGTGC CGAGGTGCGG CGGCGGCGGC CGGACATCGC GCTCGGCGCC
GATCTGATCG CCGGGTTTCC GACCGAGACC GAGGAGATGT TTCAGCGCTC GCTCGACCTC
GTCGAGGAAT GCGGCCTGAC GTTTCTGCAC GTGTTTCCGT ATTCACCGCG CCCCGGCACA
CCCGCAGCGC GGATGCCGCA GCTCGATGGC CGCGTGATCC GCGACCGCGC CGCCCGCCTG
CGTGCCGCAG GCGAAGCAGC GCTGCAGCGG CGGCTGGATG CGGAGATCGG CGCCACGCGC
GCGGTGCTGA TCGAGAGCCC GACACAGGGC CGCACCGAGC ACTTTCTCCC GGTCGCGATC
TCAGGCGCGA CGCCGGGCGA CGTGCAGACC CTGCGGATCA TCAGGCACGA TGGCGCGCGA
CTGACCGTGT AG
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| Protein sequence | MAVEVVTFGC RLNAFESELI RREAESAGLA DAIVVNSCAV TNEAVAQARQ QIRKLKRARP
EARIIVTGCA AQTEPATFAA MAEVDRVIGN DDKTRSDAWH AAKGALEAGA SFGLDTEQKI
AVADIMAVRE MAPHLLDGYQ SGLPRVFVQV QNGCDHRCTF CIIPYGRGNS RSVPVGAVVE
QVRLLAERGH AEIVLTGVDL TSYGADLPGA PKLGTLVKKV LRHVPELQRL RISSIDQVEA
DRDLIDALAT EPRLMPHLHL SLQAGDDLIL KRMKRRHARA DAIAFCAEVR RRRPDIALGA
DLIAGFPTET EEMFQRSLDL VEECGLTFLH VFPYSPRPGT PAARMPQLDG RVIRDRAARL
RAAGEAALQR RLDAEIGATR AVLIESPTQG RTEHFLPVAI SGATPGDVQT LRIIRHDGAR
LTV
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