Gene Rpal_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0249 
Symbol 
ID6407893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp265223 
End bp265921 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID642710157 
Productprotein of unknown function DUF541 
Protein accessionYP_001989285 
Protein GI192288680 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.57933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATGC TCCGCTCGCT CTCCATCGCT GCCGCCGCCT GTTGTCTGTT CGTCGCGCTC 
CCGGCCCGCG CCCAGGATGT CCCGCCGCCG GGCATCGTCG TGCGCGGCGA AGCCCAGAAG 
TCGGTCGCGC CCGACACCGC CGTGATCGAA GCCGGGGTGT CGAACTTCGC CAAGTCGGCC 
CGCGGGGCGG CGGAAGCCAC CAATCTGGCG ATCGGCAAGG TGCTGCTGGA GTTGAAGAAC 
GCCGGCATCG ACGGCAAGGA TATCCAGACC TCGCAATTGT CGCTGCAGCC GCAATACGCC 
GACCGTCCCG GCCCGAGCGA GGTCACCGGC TATGTGGCCA AGAACATCGT GTCGGTGCGG 
GTCCGCGACA TCGCGGCGGT GGCGGGCATT CTCGACCGGC TGATGGTGGC CGGCGCCAAT 
GAGGTCCGCG GCATCAGCTT CACGGTCAGC AATGCATCGA AACTGCTCGA CGAAGCGCGG 
ACCGAAGCGG TCGCCGATGC GCGTCGCAAG GCCGAGATCT ACGCTCGCGC CGCCGGCCTC 
ACGCTCGCGG CGCCGGTGTC GATCGCGGAG GATTCCGGCC CCGGCGTCAT GCCGATGCGC 
AAGATGGCGG CGGATCTGTC GGCCGGCGCT CAGGTTGCGC CGGGCGAGCA ATCCCTGAAC 
GTGTCGGTCA CGGTGAACTG GGGCGTCAAG GCGCAGTAA
 
Protein sequence
MNMLRSLSIA AAACCLFVAL PARAQDVPPP GIVVRGEAQK SVAPDTAVIE AGVSNFAKSA 
RGAAEATNLA IGKVLLELKN AGIDGKDIQT SQLSLQPQYA DRPGPSEVTG YVAKNIVSVR 
VRDIAAVAGI LDRLMVAGAN EVRGISFTVS NASKLLDEAR TEAVADARRK AEIYARAAGL 
TLAAPVSIAE DSGPGVMPMR KMAADLSAGA QVAPGEQSLN VSVTVNWGVK AQ