| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0240 |
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| Symbol | |
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| ID | 6407884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 257510 |
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| End bp | 258919 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710148 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001989276 |
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| Protein GI | 192288671 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCTA AGCCCACCAC GCTGTACGAC AAGATCTGGA ACGACCATCT GGTCCACGAG
GCCGAAGACG GCACCTGCCT GCTGTATATC GACCGCCATC TGGTGCACGA AGTGACTTCG
CCGCAGGCGT TTGAAGGTCT GCGCACCGCG GGCCGCAAGG TGCACGCGCC GGAGAAGACG
CTGGCGGTGG TCGATCACAA CGTGCCGACC ACGGATCGCT CCAAGCCCAA TCCCGATCCG
GAAAGCGCCG AGCAGATTGC CGCGCTGGCC GAGAACGCCC GTGACTTCGG CATCACCTAT
TACAACGAGT TCGACAAGCG TCAGGGCGTG GTCCACGTCA TCGGCCCGGA GCAGGGCTTC
ACGCTGCCCG GCACCACCAT CGTCTGCGGT GACAGCCACA CCTCGACCCA TGGGGCGTTC
GGCGCGCTGG CGCACGGCAT CGGCACCTCT GAGGTCGAGC ACGTGCTGGC GACCCAGACA
CTGATCCAGA AGAAGGCCAA GAATATGCGG GTGACGGTCG ACGGCCAATT GCCGGACGGC
GTCACCGCCA AGGACGTGAT CCTGGCGATC ATCGGCGAGA TCGGCACCGC GGGCGGCACC
GGCTATGTGC TGGAATACGC CGGCGACGCG ATCCGCTCGC TGTCGATGGA AGGCCGCATG
ACGGTCTGCA ACATGTCGAT CGAAGGCGGC GCCCGCGCCG GCCTGATCGC GCCCGACGCC
AAGGCTTATG AGTTCCTGAA GGGCCGCCCG CTGGCCCCGA AGGGCGAGGC CTGGGACGCA
GCGCTGCGCT ATTGGGAGAC GCTGCGCTCC GACGACGGCG CGCATTTCGA TCACGAGCTC
AAGCTCGACG CCGCTGCGCT GCCGCCGATC GTCACCTGGG GCACTTCGCC TGAGGACGTG
ATCTCGGTCA CCGGCCGCGT GCCGAACCCG GCCGACATCG CCGATGAGGC CAAGCGGCTC
TCCAAGGAGC GCGCGCTGGC CTATATGGGT CTGACCCCGG GCACCAAGAT CACCGACATC
AAGATCGACC GGATGTTCAT CGGCTCCTGC ACCAACGGCC GCATCGAAGA TCTGCGCGCC
GCCGCCAAGG TCGCCGAGGG CAAGACCGTC AACGCCAACG TCAACGCCAT CATCGTGCCG
GGCTCCGGTC TGGTGAAGGA GCAGGCCGAG GCCGAGGGTC TGGACAAGAT CTTCATCAAG
GCCGGCTTCG AATGGCGCGA GCCGGGCTGC TCGATGTGTC TCGCCATGAA CCCCGACAAG
CTGGCGCCGG AAGAGCGCTG CGCCTCGACC TCGAACCGCA ACTTCGAGGG CCGTCAGGGC
TTCAAGGGCC GCACCCATCT GGTGTCGCCG GCAATGGCCG CCGCCGCCGC GATCGCCGGC
CACTTCGTCG ACATCCGCGA CTGGCACTAA
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| Protein sequence | MSAKPTTLYD KIWNDHLVHE AEDGTCLLYI DRHLVHEVTS PQAFEGLRTA GRKVHAPEKT
LAVVDHNVPT TDRSKPNPDP ESAEQIAALA ENARDFGITY YNEFDKRQGV VHVIGPEQGF
TLPGTTIVCG DSHTSTHGAF GALAHGIGTS EVEHVLATQT LIQKKAKNMR VTVDGQLPDG
VTAKDVILAI IGEIGTAGGT GYVLEYAGDA IRSLSMEGRM TVCNMSIEGG ARAGLIAPDA
KAYEFLKGRP LAPKGEAWDA ALRYWETLRS DDGAHFDHEL KLDAAALPPI VTWGTSPEDV
ISVTGRVPNP ADIADEAKRL SKERALAYMG LTPGTKITDI KIDRMFIGSC TNGRIEDLRA
AAKVAEGKTV NANVNAIIVP GSGLVKEQAE AEGLDKIFIK AGFEWREPGC SMCLAMNPDK
LAPEERCAST SNRNFEGRQG FKGRTHLVSP AMAAAAAIAG HFVDIRDWH
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