Gene Rpal_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0232 
Symbol 
ID6407876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp250664 
End bp251542 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content67% 
IMG OID642710140 
ProductCitryl-CoA lyase 
Protein accessionYP_001989268 
Protein GI192288663 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGAC CGCGCCGCAG CCTGTTGTTC ATGCCGGGAT CGAACGCCCG GGCGCTTGAA 
AAGGCCCGGC TGCTGCCCGT CGACGGCCTG ATCCTGGACC TCGAAGACGC GGTGGCGCCC
GACGCCAAGG ATACGGCGCG CGACCAGATC GCAGCGGCGG TGGCGGCCAA GGGCTACGGC
AAGCGCGAAG TCCTGGTGCG GATCAACGCG CTCGACACCG CGTGGTGGCA GGACGACATC
GCGATGGCCG CAAAGGCCGG GCCGGACGGC ATTCTGGTGC CGAAGGTCTC GAGCATCGAA
GACATCGCCA CCGTGGGCAA CAAGCTCGCC GAACTCGGCG CCGATCCGTC GATCCGGGTC
TGGATCATGA TCGAGACCGC GCGCGGCGTG CTGCATGCCG AGGAACTGGC CGCACAGAAG
CACGAGGCCA AGTCGCGGCT GGAAGGCTTC GTGTTCGGCC CCAACGACAT CTCGCGCGAA
ACCGGCATTC GAATGCTGCC CGGCCGCTCC ACCATGCTGT CGATGATCAC GCATTGCGTG
CTCGCCGCGC GCGTCCACGG CCTGATCGCG CTGGACGGAC CGTACAGCGA CATCGGCAAT
GTCGACGGCC TGTCGGAAGA GTGCGCGCAG GCGCGCGACC TCGGCTTCGA CGGCAAGACG
CTGATCCATC CCGGCCAAAT CGACGCCTGC AACGCCGCCT TCACGCCGCC GCCCGAAGAC
GTCGCCCAGG CCCGCAAGAT CCTCGCCGCA TTCGAGCGCC CGGAGAACCA GGGCCGCGGC
GCGATCCAGC TCGACGGCCG CATGGTCGAA CGCCTGCACG CCGAAATCGC CAAGAAGACG
ATTGCGATCG CTGACGCGAT CGAGACCGCA GGCCATTAA
 
Protein sequence
MIRPRRSLLF MPGSNARALE KARLLPVDGL ILDLEDAVAP DAKDTARDQI AAAVAAKGYG 
KREVLVRINA LDTAWWQDDI AMAAKAGPDG ILVPKVSSIE DIATVGNKLA ELGADPSIRV
WIMIETARGV LHAEELAAQK HEAKSRLEGF VFGPNDISRE TGIRMLPGRS TMLSMITHCV
LAARVHGLIA LDGPYSDIGN VDGLSEECAQ ARDLGFDGKT LIHPGQIDAC NAAFTPPPED
VAQARKILAA FERPENQGRG AIQLDGRMVE RLHAEIAKKT IAIADAIETA GH