Gene Rpal_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0229 
Symbol 
ID6407873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp247963 
End bp248997 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content63% 
IMG OID642710137 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001989265 
Protein GI192288660 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTACA AAGTCGCGGT AGTGGGTGCG ACCGGCAATG TCGGGCGTGA GATGCTCGCC 
ATTCTGGACG AACGCAAATT CCCGGCCGAC GAGGTGGTGG CGCTGGCATC GCGCCGCTCG 
GTCGGCGTTG AGGTGAGCTA CGGCGACAAA ACCCTGAAAT GCAAGGCGCT CGAGCACTAC 
GACTTCAGCG ACGTCGACAT CTGCCTGATG TCGGCCGGCG GCGAAGTGTC GAAGGAATGG 
TCGCCGAAGA TCGGTGCGCA GGGCGCGGTG GTGATCGACA ACTCCAGCGC GTGGCGGATG 
GACCCGGACG TGCCGCTGAT CGTTCCGGAA GTGAACGCAG CGGCCGCGGC CGGCTTCACC 
AAGAAGAACA TCATCGCCAA TCCGAACTGC TCGACCGCGC AGCTCGTGGT GGCGCTGAAG 
CCGCTGCACG ATCACGCCAA GATCAAGCGC GTGGTGGTGT CGACCTATCA GTCGGTGTCG 
GGCGCCGGCA AGGACGCGAT GGACGAGCTG TTCTCGCAGA CCAAGGCCGT CTACACCAAC 
AGCGAGCTGG TGAATAAGAA ATTCCCCAAG CGGATCGCCT TCAACCTCAT CCCGCAGATC 
GACGTCTTCA TGGAAGACGG CTTTACCAAG GAAGAGTGGA AGATGGTGGT CGAGACCAAG 
AAGATCCTCG ACCCCAAGAT CAAACTGACC GCGACCTGCG TGCGGGTGCC GGTGTTCGTC 
AGCCACTCGG AATCGGTCAA CATCGAGTTC GAGAACCCGA TCAGCGCCGA CGAAGCGCGC 
GAGATCTTGC GCAAGGCGCC GGGCTGCCTC GTGATCGACA AGCACGAGCC GGGCGGCTAC 
GTCACGCCGT ATGAAGCCGC CGGCGAGGAT GCGACCTATA TCAGCCGCAT CCGCACCGAC 
CCGACCGTCG ACAACGGTCT GGTGCTGTGG TGCGTGTCCG ACAACCTGCG CAAGGGCGCG 
GCGCTGAACG CGATCCAGAT CGCCGAAGTG CTGATCAACC GTAAGCTGAT CACCGCCAAG 
AAGCAGGCGG CGTAG
 
Protein sequence
MGYKVAVVGA TGNVGREMLA ILDERKFPAD EVVALASRRS VGVEVSYGDK TLKCKALEHY 
DFSDVDICLM SAGGEVSKEW SPKIGAQGAV VIDNSSAWRM DPDVPLIVPE VNAAAAAGFT 
KKNIIANPNC STAQLVVALK PLHDHAKIKR VVVSTYQSVS GAGKDAMDEL FSQTKAVYTN 
SELVNKKFPK RIAFNLIPQI DVFMEDGFTK EEWKMVVETK KILDPKIKLT ATCVRVPVFV 
SHSESVNIEF ENPISADEAR EILRKAPGCL VIDKHEPGGY VTPYEAAGED ATYISRIRTD 
PTVDNGLVLW CVSDNLRKGA ALNAIQIAEV LINRKLITAK KQAA