| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0226 |
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| Symbol | |
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| ID | 6407870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 245224 |
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| End bp | 246336 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710134 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001989262 |
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| Protein GI | 192288657 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGC ACAAACTGCT TCTTCTCCCC GGCGACGGCA TCGGCACCGA AGTGATGGCC
GAGGTCAGCC GGCTGATCGA CTGGCTCAAC AAGGCCGGCA TTGCCAGCTT CGAGACCGAG
CATGGCCTGG TCGGCGGCGC CGCCTATGAC GCCGACAAGG TGGCCATCAC CGACGCCACT
ATGGCGCTGG CGCAGGCCTC CGACGCGGTG ATCTTCGGCG CGGTCGGCGG CCCGAAGTGG
GACGGCGTAC CGTACGACGC CCGCCCCGAA GCCGGCCTGC TGCGGCTGCG CAAGGATCTC
GGCCTGTTCG CCAATCTGCG GCCGGCGGTG TGCTACCCCG CGCTGGCGGA CTCCTCGAGC
TTGAAGCGCG ACGTGGTCGA AGGCCTCGAC ATCATGATCG TCCGCGAATT GACCGGCGGC
GTATATTTCG GCGAGCCGAA GACCATCACC GATCTCGGCA ACGGCCAGAA GCGCGCGGTC
GACACTCAGG TCTACGACAC CTACGAGATC GAGCGGATCG GCCGGGTCGC GTTCGACCTC
GCCCGCAAGC GCCGCAACAA GGTCACCTCG ATGGAGAAGC GCAACGTCAT GAAGACGGGC
GTGCTTTGGA ACGAAGTGAT CACCGCCGTG CACGACCGCG AATACAAGGA CGTCCAGCTC
GACCACCAGC TCGCCGACTC GGGCGGCATG AACCTGGTCA AGTGGCCGAA GCAGTTCGAC
GTCATCGTCA CCGACAACCT GTTCGGCGAC ATGCTGTCCG ACATCGCCGC GATGCTGACC
GGCTCGCTCG GCATGCTGCC GTCGGCCTCG CTCGGCGAAG TCGACGCCAA GACCGGCAAG
CGCAAGTCGA TGTACGAGCC GGTGCACGGC TCGGCCCCGG ACATCGCCGG CAAGGGCATG
GCCAACCCGG TGGCGATGCT GGCCTCGTTC GGCATGGCGC TGCGCTATTC GCTCGACATG
GGCGCGCTGG CCGACAAGCT TGACGAAGCG ATCGCCGCGG TGCTGGCCAA GGGCCTGCGC
ACCGCCGACA TCAAGAGCGA AGGCACCACG GTGATCTCGA CCTCGCAGAT GGGCGAAGCG
ATCGTCACCG AACTGCAGGC CCTGCACGCC TGA
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| Protein sequence | MATHKLLLLP GDGIGTEVMA EVSRLIDWLN KAGIASFETE HGLVGGAAYD ADKVAITDAT
MALAQASDAV IFGAVGGPKW DGVPYDARPE AGLLRLRKDL GLFANLRPAV CYPALADSSS
LKRDVVEGLD IMIVRELTGG VYFGEPKTIT DLGNGQKRAV DTQVYDTYEI ERIGRVAFDL
ARKRRNKVTS MEKRNVMKTG VLWNEVITAV HDREYKDVQL DHQLADSGGM NLVKWPKQFD
VIVTDNLFGD MLSDIAAMLT GSLGMLPSAS LGEVDAKTGK RKSMYEPVHG SAPDIAGKGM
ANPVAMLASF GMALRYSLDM GALADKLDEA IAAVLAKGLR TADIKSEGTT VISTSQMGEA
IVTELQALHA
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