Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0224 |
Symbol | |
ID | 6407868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 243232 |
End bp | 243750 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642710132 |
Product | superoxide dismutase copper/zinc binding |
Protein accession | YP_001989260 |
Protein GI | 192288655 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.504945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCTGC GAGCTTTGTT GTGCACCGGC GCGCTGCTCG GCGTCACCAC GGCGGCGATG GCGGCGGACA GCGCCAAGGC GACGCTGAAG AACGCCGAAG GCACCGAGAT CGGCACCGCG ACGCTGACCG AGGGCAGCAA GGGCGTCACC ATCAAGCTGG CGCTGAAGGG ACTGCCGCCG GGCGAACACG CCTTCCACAT CCACGCAGTC GGCAAATGCG AGCCGCCGTT CACCTCGGCA GGCGGCCATT TCAATCCGGA GAACAAGAAG CACGGCAAGA TGGCCGAGGG CGGCGCCCAT GCGGGCGATA TGCCGAACCT CGACGTGCCG GCCTCCGGCG CGCTGAGTAT CGACGTCGTC AACGACGCGG TGACGCTCGC CAAGGGCAAG CCGAACTCGG TCTTCAAGGA CGGCGGCACC GCGCTGGTGA TCCACGCCAA GGCCGACGAC TACAAATCAG ATCCCGCCGG GAACGCCGGC GACCGCATCG CCTGCGGGGT GATCGAGGAA GCTAAGTAA
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Protein sequence | MILRALLCTG ALLGVTTAAM AADSAKATLK NAEGTEIGTA TLTEGSKGVT IKLALKGLPP GEHAFHIHAV GKCEPPFTSA GGHFNPENKK HGKMAEGGAH AGDMPNLDVP ASGALSIDVV NDAVTLAKGK PNSVFKDGGT ALVIHAKADD YKSDPAGNAG DRIACGVIEE AK
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