| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0219 |
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| Symbol | |
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| ID | 6407863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 237664 |
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| End bp | 238608 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710127 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_001989255 |
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| Protein GI | 192288650 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.221068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCACG ATCATCATCA CCATCATGGG CCCGGTGCCG CGCACGGCGC CGGTGGCCAC
AGTCACGCGC CGCAGGATTT CGGCCGCGCG TTTGCGATCG GCATCGCGCT CAACATGGTG
TTCGTGGTCG CCGAAGCGGC ATTCGGTTAC TTCAGCAATT CGATGGCGCT GATCGCCGAC
GCCGGCCACA ACCTGTCCGA TGTCGCCGGG CTGGTGGTGG CGTGGATCGC CGCCGGGCTA
TCGAAGCGGC CGCCCTCGGC GCGCTACACC TACGGACTGC GCGGCTCCTC GATTCTGGCA
GCGCTGTTCA ACGCGGTGTT TCTGCTGCTC GCTGTTGGCG CAATCGGATG GGAAGCGGTG
GTGCGGCTGT TCGCGCCGGA GCCGGTCGCA GGTATCACCG TGATGGTGGT GGCCGGGATC
GGCATCGTCA TCAATGCCGT GACCGCCTGG CTGTTCGCGT CGGGCCGTCA CAGCGACCTC
AACATCCGCG GCGCTTACTT GCACATGGCG GCGGATGCTG CGGTGTCGGC CGCAGTGGTG
GTGGCCGGCG TGATCATCCT GTTGACCGGC TGGTACTGGA TTGATCCGGC CGTCAGCCTG
ATCGTCGCGG TGGTGATCGT TTGGGGCACC TGGGGCCTAT TGCGCGATTC CACCGCGCTG
TCGCTCGCCG CCGTGCCGCG CGACATCGAT CCCACAGCGG TGCGGGCGTT CCTGTCGAAA
CTTCCCGGCG TCACGCAGGT CCACGACCTG CACATCTGGG GGATGTCGAC CACCGAAGTG
GCGCTGACCT GCCATCTGGT GATGCCCAGC GGCTCGCCGG GAGATCCCTT CCTGGTCGAC
CTCGCCCACG AATTGCAGCA CGATTTCGGT ATCGCGCACA CCACGGTGCA GATCGAGACC
GATCCCAACA CGGTATGCGC ACTAGCGCCG GAGCACGTGG TGTAG
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| Protein sequence | MSHDHHHHHG PGAAHGAGGH SHAPQDFGRA FAIGIALNMV FVVAEAAFGY FSNSMALIAD
AGHNLSDVAG LVVAWIAAGL SKRPPSARYT YGLRGSSILA ALFNAVFLLL AVGAIGWEAV
VRLFAPEPVA GITVMVVAGI GIVINAVTAW LFASGRHSDL NIRGAYLHMA ADAAVSAAVV
VAGVIILLTG WYWIDPAVSL IVAVVIVWGT WGLLRDSTAL SLAAVPRDID PTAVRAFLSK
LPGVTQVHDL HIWGMSTTEV ALTCHLVMPS GSPGDPFLVD LAHELQHDFG IAHTTVQIET
DPNTVCALAP EHVV
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