| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0215 |
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| Symbol | sdhB |
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| ID | 6407859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 233760 |
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| End bp | 234542 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642710123 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_001989251 |
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| Protein GI | 192288646 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.496773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTGAAT TCGCACTTCC GAAGAATTCG AAGATTGTCG GCGGCAAGAC CTGGCCGAAG
CCGGAAGGCG CGACCGAGGT TCGTGAATTC CGCGTCTATC GCTGGAATCC GGACGACGGC
AAGAACCCGA GCGTCGACAC CTACTACGTC GACAAGCACG ACTGCGGCCC GATGGTTCTC
GACGGCCTGA TCTGGATCAA GAACAACATC GACCCGACCC TGACCTTCCG CCGCTCCTGC
CGCGAAGGCG TGTGCGGCTC GTGCGCGATG AACATCGACG GCGAGAACAC GCTGGCCTGC
ACCAAGGCGA TGGACGACGT TCGCGACGAC GCCGTGAAGA TCAACCCGCT GCCGCACCAG
CCGGTGGTGA AGGATCTGGT TCCAGACCTG ACCAACTTCT ACGCGCAATA CGCCTCGATC
CAGCCCTGGC TGCAGACCGT GACACCGACC CCGCAGAAGG AATGGCGGCA GAGCCACTCC
GACCGCGAGA AGCTCGACGG CCTGTACGAG TGCATCCTGT GCGCCTGCTG CTCGACCTCG
TGCCCGAGCT ACTGGTGGAA CTCGGATCGC TTCCTCGGCC CGGCCGCGCT GCTGCAGGCG
ACCCGCTGGG TCGAAGACAG CCGCGATGAA GCCACCGGCG AGCGCCTCGA CAATCTCGAA
GATCCGTTCC GGATCTATCG CTGCCACACC ATCATGAACT GCGCCAAGGC GTGCCCGAAG
GGTCTCAACC CGTCGGAAGC GATCGCCAAC CTCAAGCTCA AGCTGGTTGA ACGCCAGATC
TGA
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| Protein sequence | MVEFALPKNS KIVGGKTWPK PEGATEVREF RVYRWNPDDG KNPSVDTYYV DKHDCGPMVL
DGLIWIKNNI DPTLTFRRSC REGVCGSCAM NIDGENTLAC TKAMDDVRDD AVKINPLPHQ
PVVKDLVPDL TNFYAQYASI QPWLQTVTPT PQKEWRQSHS DREKLDGLYE CILCACCSTS
CPSYWWNSDR FLGPAALLQA TRWVEDSRDE ATGERLDNLE DPFRIYRCHT IMNCAKACPK
GLNPSEAIAN LKLKLVERQI
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