Gene Rpal_0210 details

Gene Information

• Locus tag: Rpal_0210
• ID: 6407854
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 229876
• End bp: 230403
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642710118
• Product: ErfK/YbiS/YcfS/YnhG family protein
• Protein accession: YP_001989246
• Protein GI: 192288641
• COG category: [S] Function unknown
• COG ID: [COG1376] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.521298
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTTG GATTTCGTTC GGCGAAATTG GCCATGGTGG CCGTGGTCTT GGCGGGCGCC 
AGCGTGCTGA CCGCGCCGCG GGCCGAAGCG CGGCCCGACC TGGTCGTCTT CCGCGGCGAC 
TATTCGCCGG GGACGATCGT GGTGCGGACC GGCGAGCGGC GGCTGTACCT GGTGGTCGAG 
CCGGGCCACG CGGTGCGTTA TCCGGTCGGC GTCGGCAAGG CCGGCAAGCA ATGGGCCGGC 
GTCACCAAGA TCGACGGCAA ATTTCGCAAT CCGGCCTGGG CCCCGCCGGC CGAGGTCAAG 
CGCGATGTCC CGACCATTCC GGACGTGATC CCGGGCGGAT CGCCGGCCAA CCCAATGGGC 
GTCGCTGCGA TGACGCTGGC AGGTGGCGAA TACGCCATCC ACGGCACCAA CCGGCCACAG 
TCGATCGGCG GCTTCGTGTC CTATGGCTGC ATCCGGATGC TGAATGACGA CATCACCGAT 
CTGTACGAGC GCGTCCCGGT CGGCACTCAG GTGGTGGTGA TGCGCTGA 

 

Protein sequence

MSFGFRSAKL AMVAVVLAGA SVLTAPRAEA RPDLVVFRGD YSPGTIVVRT GERRLYLVVE 
PGHAVRYPVG VGKAGKQWAG VTKIDGKFRN PAWAPPAEVK RDVPTIPDVI PGGSPANPMG 
VAAMTLAGGE YAIHGTNRPQ SIGGFVSYGC IRMLNDDITD LYERVPVGTQ VVVMR