| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0208 |
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| Symbol | |
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| ID | 6407852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 226209 |
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| End bp | 227177 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710116 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001989244 |
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| Protein GI | 192288639 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.528553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAA GCCACCCAGA TCAATTCGAG CCGCCGGAAC TGACCCCCGA CGAGATCCAG
GCCCGCGTGC TGTATCGCGA CGGGCTGATG CTGGTGATCG ATAAACCGCC GGGGCTGCCG
GTGCATCGCG GCCCGAAGGG CGGTCCGAAC CTGGAGGCTT CGTTCGATGC GCTCCGCTAC
GGTTTGCCGC GCCCCCCGGT GCTGGCGCAT CGGCTCGACC GCGACACCTC CGGCTGCCTG
GTGCTCGGCC GCCACCGCAA GGCCACCGCC ACGCTGGGGC TGCTGTTCAA GCATTCGCGG
ATTTCCAAGA CCTATTGGGC AATCGTCGAA GGCGGCCCGA CCGAAGACCA AGGCAGCATC
GACCTGCCAA TCGCCAAGCT CAACGCCGAA CGCGGCTGGT GGCAGAAGGT CGATCCAGAA
GGGTTACCGT CGCTGACGAA GTGGCGGGTA ATGGGGCGGT CGGGAGTTTT GCCGGCCGCC
GCGACGACCA CCTCCGCAAC ATCCGCCCCG ATCCGCGACG CCACGACAAG CGGCTCCCCT
CCCCCTTGCG GGGAGGGGTC GGGGGTGGGG GTCCACAGCG GCAGCCTTAC TTCGGGGCGC
CCTCACCCCA ACCCTCTCCC GCGAGCGGGA GAGGGAGTTC GCCCTGCTCG GGGAGAGGCA
GATAATCTGT CTCGAAAGCC GGGCGCGATC CTTGGCGCGC CGCCTCCGAC GCAGCTCACC
TGGCTGGCGC TCGAGCCGAT CACAGGCCGG ACCCATCAGC TCCGGGTTCA TTGCGCCGCG
ATGGGCTGGC CGATCCTCGG CGACAACATC TATGGCAATG GCCCGCGGTT CGGCGAACCG
CGGCTGCATC TGCATGCCCG CGAGATCGTC ATCCCATTGT CACGCAACAA GCCGCCTGTG
GTGGTCACAG CGCCGCCGCC GACGCATATG CACCCGCGGC TCTCGGCCTG CGGCTGGACC
GCAGACTGA
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| Protein sequence | MNESHPDQFE PPELTPDEIQ ARVLYRDGLM LVIDKPPGLP VHRGPKGGPN LEASFDALRY
GLPRPPVLAH RLDRDTSGCL VLGRHRKATA TLGLLFKHSR ISKTYWAIVE GGPTEDQGSI
DLPIAKLNAE RGWWQKVDPE GLPSLTKWRV MGRSGVLPAA ATTTSATSAP IRDATTSGSP
PPCGEGSGVG VHSGSLTSGR PHPNPLPRAG EGVRPARGEA DNLSRKPGAI LGAPPPTQLT
WLALEPITGR THQLRVHCAA MGWPILGDNI YGNGPRFGEP RLHLHAREIV IPLSRNKPPV
VVTAPPPTHM HPRLSACGWT AD
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