| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0201 |
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| Symbol | |
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| ID | 6407845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 221675 |
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| End bp | 222343 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642710109 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_001989237 |
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| Protein GI | 192288632 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.168434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGCGC TCGGCGCCAT CATTCGCCGC GATATCAGGA TTGCGCTCCG CGTCGGCGGC
GGGGCGCTGA TCGGCGTGCT GTTCTTCCTC ACCGTGGTGG TGCTGATGCC GTTCGCGGTC
GGCCCGGACC TTGCGCTGCT CAAACGCCTC GGCCCCGCGA TCCTGTGGCT CGGCGCGCTG
CTCGCCAGCC TGCTGACGCT CGACCGGCTG TTCACTGCCG ACGCCGAGGA CGGCTCGCTC
GACCTGATCG TGATGAGCCG CACCCCGCTG GAGCTGACCT GCGCCGCCAA GGCGCTGGCG
CACTGGCTGG CAGCGGGTCT GCCGCTGATC GTCGCCACCC CGGTGCTCGG CCTGTTGCTC
AATCTCGACG GCAGCGCCTC GCTGGCCGTG ATGGCGACGC TGCTGGCCGG CACCCCGGCA
CTGACCTTCA CCGGCATGAT CGGCGCCGCA CTGGCGGTGG CGCTGCGGCG CGGCGGCCTG
CTGCTGGCCG TGCTGGTGCT GCCGCTGTCG ATCCCGGTGC TGATCTTCGG AGTTTCCGCC
TCCCAGGCAG CGATCGTCGG CCCGGTGTCG TTCGGCACCC CGTTCTCGAT CCTGTGCGCG
ATCTCGCTGC TCAGCCTGGT GATCGGCCCG TTCGCCGCCG CCGCCAGCCT GCGGCAGGGA
CTGGATTAG
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| Protein sequence | MTALGAIIRR DIRIALRVGG GALIGVLFFL TVVVLMPFAV GPDLALLKRL GPAILWLGAL
LASLLTLDRL FTADAEDGSL DLIVMSRTPL ELTCAAKALA HWLAAGLPLI VATPVLGLLL
NLDGSASLAV MATLLAGTPA LTFTGMIGAA LAVALRRGGL LLAVLVLPLS IPVLIFGVSA
SQAAIVGPVS FGTPFSILCA ISLLSLVIGP FAAAASLRQG LD
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