| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0199 |
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| Symbol | |
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| ID | 6407843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 218143 |
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| End bp | 220860 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642710107 |
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| Product | aconitate hydratase |
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| Protein accession | YP_001989235 |
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| Protein GI | 192288630 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00485304 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCGC TCGACAGCTT CAAATGCCGG AAGATCCTCA AGGTCGGCAG CAAGTCTTAC
GTCTATTACA GCCTGCCCAC TGCCGAGAAG AATGGCCTGA AGGGGATCTC CCGTCTGCCC
TACTCGATGA AGGTGCTGCT GGAAAACCTG CTGCGCAACG AGGACGACCG CACCGTCAAG
AAGGCCGACA TCATGGCGGT CGCCAAGTGG ATGCGGAAGA AGGCGCTGGA GCACGAAATC
GCATTCCGCC CGGCGCGCGT GCTGATGCAG GACTTCACCG GCGTGCCGGC CGTGGTCGAT
CTGGCGGCGA TGCGCAACGC GATGCAGAAG CTCGGTGGTG ATGCCGAGAA GATCAATCCG
CTGGTGCCGG TCGACCTCGT GATCGACCAC TCGGTGATCG TCAACTTCTT CGGTAACAAC
CAGGCGTTCA AGAAGAACGT CGCCGAGGAG TACAAGCAGA ACCAGGAGCG CTACGAGTTC
CTGAAGTGGG GCCAGAAGGC ATTCTCGAAC TTCGCGGTGG TGCCGCCCGG CACCGGCATC
TGCCACCAGG TCAATCTCGA GTACTTGGCG CAGACGGTCT GGACCAAGAA GGAGAAGATG
ACGATCGTCC GCAAGACCGG TACCTTCGAA GTCGCCTATC CGGACACGCT GGTCGGTACC
GACTCGCACA CCACCATGGT CAACGGTCTC GCCGTGCTCG GCTGGGGCGT CGGTGGCATC
GAGGCGGAAG CTGCGATGCT CGGCCAGCCG CTGTCGATGC TGCTGCCCGA AGTGGTCGGC
TTCAAGCTCA AGGGCGCGCT CAAGGAAGGC GTCACCGCGA CCGACTTGGT GCTGACCGTC
ACCCAGATGC TGCGTAAGCA GGGCGTGGTC GGCAAGTTCG TCGAATTCTT CGGCCCGGGC
CTCGACAACC TCTCGGTCGC CGACAAGGCG ACGATCGCCA ATATGGCGCC GGAATATGGT
GCGACCTGCG GCTTCTTCCC GGTCGACGGT GAAACCATCG ATTACTTGAA GACCTCGGGC
CGTGCCTCGG CACGCGTCGC GCTGGTCGAG AAGTACGCCA AGGCGCAGGG CCTGTTCCGC
ACCGCCAAGT CGCCGGACCC GGTGTTCACC GTGACGCTGA CGCTGGACCT CGCCGACGTG
GTGCCGTCGC TGGCCGGTCC GAAGCGTCCC GAGGGTCGCG TCGCGCTGCC GGCGGTGGCG
GAAGGCTTCA CCACGGCGAT GGACGCCGAA TACAAGAAGG CGCTCGACGG CGCCCGCTAC
AAGGTCGAAG GTCGCAATTT CGATATCGGC CATGGTGACG TGGTGATCGC GGCGATCACC
TCCTGCACCA ACACCTCGAA CCCGAGCGTG CTGATCGGCG CCGGCCTGTT GGCGCGTAAC
GCCGCCGCCA AGGGCCTCAA GGCGGCGCCG TGGGTGAAGA CCTCGCTGGC CCCGGGCTCG
CAGGTCGTCG CCGAGTATCT GGCGAACTCG GGTCTGCAGA AGGACCTCGA CAAGGTCGGC
TTCAACCTGG TCGGCTTCGG CTGCACCACC TGCATCGGCA ATTCCGGCCC GCTGCCGGAG
GAGATCTCGA AGTCGATCAA CGACAACGGC ATCGTTGCCG CCGCCGTGCT GTCGGGCAAC
CGCAACTTCG AAGGCCGCGT CTCGCCGGAC GTGCAGGCGA ACTATCTGGC GTCGCCGCCG
CTGGTGGTGG CCTACGCGCT CGCCGGCTCG GTGACCAAGA ACCTCGCGGT CGATCCGATC
GGCACCGGCA AGGACGGCAA GCCGGTTTAC CTGAAGGACA TCTGGCCGAG CACCAAGGAG
ATCAACGCCT TCGTCAAGAA GTACGTGACC TCCAAGATCT TCAAGGCGCG CTACGCCGAC
GTGTTCAAGG GCGACACCAA CTGGCGCAAG ATCAAGACGG TCGAGTCCGA GACCTACAAG
TGGAACATGT CGTCGACCTA CGTGCAGAAC CCGCCGTATT TCGAAGGCAT GACCAAGCAG
CCGGAGCCGA TCACCGACGT GGTCGACGCC CGCGTGCTGG CGCTGTTCGG CGACAAGATC
ACCACCGACC ACATCTCGCC GGCCGGTTCG ATCAAGCTGA CGTCGCCGGC TGGTAAGTAT
CTGACCGAGC GTCAGGTCCG CCCGGCCGAC TTCAATCAGT ACGGCACCCG CCGCGGCAAC
CATGAAGTGA TGATGCGCGG CACCTTCGCC AACATCCGCA TCAAGAACCA CATGCTGAAG
GGCGCCGACG GCAACATTCC GGAAGGCGGC CTGACCAAGC ACTGGCCCGA CGGCGAGCAG
ATGTCGATCT ACGACGCTGC CATGAAGTAC CAGGAAGAGA AGGTGCCGCT GGTGGTGTTC
GCCGGTGCCG AATACGGCAA CGGTTCGTCG CGCGACTGGG CCGCGAAAGG CACCCGTCTG
CTCGGCGTTC GCGCCGTGAT CTGCCAGAGC TTCGAGCGCA TCCACCGCTC GAACCTGGTC
GGCATGGGCG TGTTGCCGCT GACCTTCGAA GAGGGCACCT CGTGGGCCTC GCTCGGCCTC
AAGGGCGACG AGAAGGTCAC GATCCGCGGC CTCGAGGGCG ACCTCAAGCC GCGGCAGATG
CTGGAAGCCG AGATCACCTC GGCTGCAGGC AAGCGCAAGC GCGTGCCGTT GCTGTGCCGC
ATCGATACGC TCGACGAACT CGATTACTAC CGCAACGGCG GTATTCTGCA CTACGTGCTG
CGCAAGCTCG CGGCCTGA
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| Protein sequence | MTSLDSFKCR KILKVGSKSY VYYSLPTAEK NGLKGISRLP YSMKVLLENL LRNEDDRTVK
KADIMAVAKW MRKKALEHEI AFRPARVLMQ DFTGVPAVVD LAAMRNAMQK LGGDAEKINP
LVPVDLVIDH SVIVNFFGNN QAFKKNVAEE YKQNQERYEF LKWGQKAFSN FAVVPPGTGI
CHQVNLEYLA QTVWTKKEKM TIVRKTGTFE VAYPDTLVGT DSHTTMVNGL AVLGWGVGGI
EAEAAMLGQP LSMLLPEVVG FKLKGALKEG VTATDLVLTV TQMLRKQGVV GKFVEFFGPG
LDNLSVADKA TIANMAPEYG ATCGFFPVDG ETIDYLKTSG RASARVALVE KYAKAQGLFR
TAKSPDPVFT VTLTLDLADV VPSLAGPKRP EGRVALPAVA EGFTTAMDAE YKKALDGARY
KVEGRNFDIG HGDVVIAAIT SCTNTSNPSV LIGAGLLARN AAAKGLKAAP WVKTSLAPGS
QVVAEYLANS GLQKDLDKVG FNLVGFGCTT CIGNSGPLPE EISKSINDNG IVAAAVLSGN
RNFEGRVSPD VQANYLASPP LVVAYALAGS VTKNLAVDPI GTGKDGKPVY LKDIWPSTKE
INAFVKKYVT SKIFKARYAD VFKGDTNWRK IKTVESETYK WNMSSTYVQN PPYFEGMTKQ
PEPITDVVDA RVLALFGDKI TTDHISPAGS IKLTSPAGKY LTERQVRPAD FNQYGTRRGN
HEVMMRGTFA NIRIKNHMLK GADGNIPEGG LTKHWPDGEQ MSIYDAAMKY QEEKVPLVVF
AGAEYGNGSS RDWAAKGTRL LGVRAVICQS FERIHRSNLV GMGVLPLTFE EGTSWASLGL
KGDEKVTIRG LEGDLKPRQM LEAEITSAAG KRKRVPLLCR IDTLDELDYY RNGGILHYVL
RKLAA
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