| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0198 |
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| Symbol | |
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| ID | 6407842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 217221 |
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| End bp | 217976 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642710106 |
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| Product | protein of unknown function DUF1223 |
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| Protein accession | YP_001989234 |
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| Protein GI | 192288629 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5429] Uncharacterized secreted protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000361899 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGGTG TTGGTGGATT TTCGCGGTGG TCCGGCGCAC TCGGCCTGTG CGTGACGATC
GCGACGGCGG ACCTTGCTGC CGCCGAGCCC CGCGCCGTGG TCGAGCTGTT CACCTCGCAA
GGTTGTTCGT CCTGTCCGCC GGCGGACAGG ATCATCGGTG AACTTGCACG TGATCCATCG
GTGATCGCCC TGAGCCTCCC GATCGACTAC TGGGACTATC TCGGCTGGAA AGACACCTTG
GCCGACTCCC GTTTTACCGC TCGACAGAAA GCCTACTCGC AAGTGCGAGG CGATCGGGAC
GTGTTCACCC CACAGGTCGT CGTCAACGGG TCGGCGCACC TCGTCGGCAG CAATCGCGCC
GGCATCGACA GCGCGATCAA GACCACCGAC AAGACCGGCG GAGTCATGAC CGTGCCGGTC
TCGGTGGCGG TCGAGGGCAA AGAAATCAAA GTCTCGGTCG CAGCGGCGCC CCAGGGCGAG
ACCGCCAAGA GCGGCGAGGT CTGGATTTGC GCGGTGTCCA AAGCGATTCC GATCGAGATC
GGGCGCGGCG AGAACCGCGG CCGGCACGTC ACCTACCACA ACGTAGTGCG CAATCTGCTG
AAGGTCGGCG ATTGGACCGG TGCGGCAGAG CATTGGACGG TGCCGCTGGA GAATGTCGTC
GGCGACGGCG TCGATGCGGC GGCGGTCTAT GTGCAGAACG GTAGCCGCGA AAAGCCCGGT
GCGATGCTCG GGGCCGCCTT CACGTCGCTG AACTAA
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| Protein sequence | MNGVGGFSRW SGALGLCVTI ATADLAAAEP RAVVELFTSQ GCSSCPPADR IIGELARDPS
VIALSLPIDY WDYLGWKDTL ADSRFTARQK AYSQVRGDRD VFTPQVVVNG SAHLVGSNRA
GIDSAIKTTD KTGGVMTVPV SVAVEGKEIK VSVAAAPQGE TAKSGEVWIC AVSKAIPIEI
GRGENRGRHV TYHNVVRNLL KVGDWTGAAE HWTVPLENVV GDGVDAAAVY VQNGSREKPG
AMLGAAFTSL N
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