Gene Rpal_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0190 
Symbol 
ID6407834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp208301 
End bp208915 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content67% 
IMG OID642710100 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_001989228 
Protein GI192288623 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00452588 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCGC TGCCTGGACA AACCGCGCGG GCCGAGACGG CCGCCAAGCC GCTGAAGCTG 
GTGGTGCTCG GGGACTCGCT GACCGCCGGC TACGGCCTGC CGGCCGCCGA TGCGTTTCCG 
GCCAAGCTGC AAAAGGCACT CAAGGCCAAA GGCATCGACA CCGAGATGGT GAACGCTGGC 
GTATCCGGTG ATACCGCCAG CGGCGGCCTG CAGCGGCTCG ACTGGTCGGT CCCCCCTGAT 
GCGGACGCGG TCATCGTCGA GCTCGGCGCC AACGATGCGC TGCGCGGCAC CGATCCGAAG 
GTCCCGCGCA AGGCGCTGGA CGAGATCTTG AAGCGGTTGA AGGCGCGCAA TCTGCCGGTG 
CTGCTCGCCG GCATGCTGGC GCCGCCGAAT TACGGCAAAG ACTACGCCGC GCAGTTCGAC 
GCGATCTATC CGGACCTTGC CAAGCAGTAC GACGTGCCGC TGTATCCGTT CTTCCTCGAC 
GGCGTCGCGG CGGTGTCGAA TCTCAATCAG GCCGACGGCA TCCATCCGAC CGCGGCCGGC 
GTCGACATCA TCGTCGAGCG GATTTTGCCC AAGGTTGAGG CGCTGCTTCG CCCGCTCCTG 
GTGCAGAGCC GCTGA
 
Protein sequence
MAALPGQTAR AETAAKPLKL VVLGDSLTAG YGLPAADAFP AKLQKALKAK GIDTEMVNAG 
VSGDTASGGL QRLDWSVPPD ADAVIVELGA NDALRGTDPK VPRKALDEIL KRLKARNLPV 
LLAGMLAPPN YGKDYAAQFD AIYPDLAKQY DVPLYPFFLD GVAAVSNLNQ ADGIHPTAAG 
VDIIVERILP KVEALLRPLL VQSR