Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0185 |
Symbol | |
ID | 6407829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 202934 |
End bp | 203818 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642710095 |
Product | succinyl-CoA synthetase, alpha subunit |
Protein accession | YP_001989223 |
Protein GI | 192288618 |
COG category | [C] Energy production and conversion |
COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCATTC TGATCGACAG CAACACCCGC GTTATCTGCC AGGGCTTCAC CGGCAAGAAC GGTACCTTCC ATTCCGAGGC AGCGATCGCC TACGGCACCA AGATGGTCGG CGGCACCTCG CCGGGCAAAG GCGGCTCGAC CCACCTCGGC CTGCCGGTGT TCGACACCGT CCGTGAGGCG CGCGACAAGA CCGGGGCGGA TGCGTCGGTG ATCTACGTGC CGCCGCCGGG CGCCGCGGAC GCGATCTGCG AGGCGATCGA CGCCGAGATC CCGCTGATCG TCTGCATCAC CGAGGGCATC CCGGTGCTCG ACATGGTGCG GGTGAAGCGG TCGCTGAATG GCTCGAAGTC GCGCCTGATC GGGCCGAACT GCCCGGGCGT GATGACCGCC GGCGAGTGCA AGATCGGCAT CATGCCGGCC AACATCTTCA AGCCGGGCTC GGTCGGCATC GTGTCGCGCT CCGGCACCCT GACCTATGAG GCGGTGTTCC AGACCTCGGC CGAGGGCCTC GGCCAGACCA CCGCGGTCGG CATCGGCGGC GACCCGGTCA AGGGCACCGA ATTCATCGAC GTGCTGGAGA TGTTCCTGGC CGACGACAAG ACCGAGTCGA TCATCATGAT CGGTGAGATC GGCGGTTCGG CCGAAGAAGA CGCCGCCCAG TTCCTGATCG ACGAGGCCAA GCGCGGCCGC AAGAAACCGA TGGTCGGATT CATCGCCGGC GTCACTGCCC CTCCCGGCCG CCGCATGGGC CACGCCGGTG CGATCATTTC GGGCGGCAAG GGCGATGCGG CCTCGAAGAC CGCAGCCATG GAAGCGGCTG GCATCACCGT GTCGCCGTCG CCGGCGCGTC TTGGCAAAAC GCTTGCCGAA AAGTTGAAGT CCTAA
|
Protein sequence | MSILIDSNTR VICQGFTGKN GTFHSEAAIA YGTKMVGGTS PGKGGSTHLG LPVFDTVREA RDKTGADASV IYVPPPGAAD AICEAIDAEI PLIVCITEGI PVLDMVRVKR SLNGSKSRLI GPNCPGVMTA GECKIGIMPA NIFKPGSVGI VSRSGTLTYE AVFQTSAEGL GQTTAVGIGG DPVKGTEFID VLEMFLADDK TESIIMIGEI GGSAEEDAAQ FLIDEAKRGR KKPMVGFIAG VTAPPGRRMG HAGAIISGGK GDAASKTAAM EAAGITVSPS PARLGKTLAE KLKS
|
| |