Gene Rpal_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0185 
Symbol 
ID6407829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp202934 
End bp203818 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content66% 
IMG OID642710095 
Productsuccinyl-CoA synthetase, alpha subunit 
Protein accessionYP_001989223 
Protein GI192288618 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATTC TGATCGACAG CAACACCCGC GTTATCTGCC AGGGCTTCAC CGGCAAGAAC 
GGTACCTTCC ATTCCGAGGC AGCGATCGCC TACGGCACCA AGATGGTCGG CGGCACCTCG
CCGGGCAAAG GCGGCTCGAC CCACCTCGGC CTGCCGGTGT TCGACACCGT CCGTGAGGCG
CGCGACAAGA CCGGGGCGGA TGCGTCGGTG ATCTACGTGC CGCCGCCGGG CGCCGCGGAC
GCGATCTGCG AGGCGATCGA CGCCGAGATC CCGCTGATCG TCTGCATCAC CGAGGGCATC
CCGGTGCTCG ACATGGTGCG GGTGAAGCGG TCGCTGAATG GCTCGAAGTC GCGCCTGATC
GGGCCGAACT GCCCGGGCGT GATGACCGCC GGCGAGTGCA AGATCGGCAT CATGCCGGCC
AACATCTTCA AGCCGGGCTC GGTCGGCATC GTGTCGCGCT CCGGCACCCT GACCTATGAG
GCGGTGTTCC AGACCTCGGC CGAGGGCCTC GGCCAGACCA CCGCGGTCGG CATCGGCGGC
GACCCGGTCA AGGGCACCGA ATTCATCGAC GTGCTGGAGA TGTTCCTGGC CGACGACAAG
ACCGAGTCGA TCATCATGAT CGGTGAGATC GGCGGTTCGG CCGAAGAAGA CGCCGCCCAG
TTCCTGATCG ACGAGGCCAA GCGCGGCCGC AAGAAACCGA TGGTCGGATT CATCGCCGGC
GTCACTGCCC CTCCCGGCCG CCGCATGGGC CACGCCGGTG CGATCATTTC GGGCGGCAAG
GGCGATGCGG CCTCGAAGAC CGCAGCCATG GAAGCGGCTG GCATCACCGT GTCGCCGTCG
CCGGCGCGTC TTGGCAAAAC GCTTGCCGAA AAGTTGAAGT CCTAA
 
Protein sequence
MSILIDSNTR VICQGFTGKN GTFHSEAAIA YGTKMVGGTS PGKGGSTHLG LPVFDTVREA 
RDKTGADASV IYVPPPGAAD AICEAIDAEI PLIVCITEGI PVLDMVRVKR SLNGSKSRLI
GPNCPGVMTA GECKIGIMPA NIFKPGSVGI VSRSGTLTYE AVFQTSAEGL GQTTAVGIGG
DPVKGTEFID VLEMFLADDK TESIIMIGEI GGSAEEDAAQ FLIDEAKRGR KKPMVGFIAG
VTAPPGRRMG HAGAIISGGK GDAASKTAAM EAAGITVSPS PARLGKTLAE KLKS