Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0184 |
Symbol | sucA |
ID | 6407828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 199849 |
End bp | 202806 |
Gene Length | 2958 bp |
Protein Length | 985 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642710094 |
Product | 2-oxoglutarate dehydrogenase E1 component |
Protein accession | YP_001989222 |
Protein GI | 192288617 |
COG category | [C] Energy production and conversion |
COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGCC AGGACGCGAA TGCCGCTTTC GCCCTATCCT CCTTTCTACA GGGCGCCAAC GCCACCTATA TCGACGATCT GTACTCTCGG TACGAAAGCG ATCCGTCCTC GGTTGATGCC GACTGGCAGG CATTCTTCCG GAGCCTCAAA GACGCCCCCG GCGACATCCA GAAGAATGCC GAGGGCCCGT CCTGGGAGCA GGCGAACTGG CCGCTGACCC CGCGGGACGA GCTGACCTCG GCGCTCGACG GCAACTGGAA CCAGGTCGAA AAGGCCGTCG GCCAGAAGAT CCAGGCCAAG GCTCAGAGCC GCGGCGTCGA ACTGTCCTCC GCCGACGTGC TGCAGGCCAC CCGCGACTCG GTCCGGGCCC TGATGCTGAT CCGCGCCTAC CGGATGCGCG GCCATTTCCA CGCCAAGCTC GATCCGCTCG GCCTGTCGCC GGCGAAGGAT CACGAGGAGT TGGACATCCG CTCCTACGGC TTCACCGAGG CCGATCTCGA CCGCAAGATC TTCCTCGATC ACGTCCTTGG CCTGGAATAC GGCTCGCTCC GCGAGATCGT CGCGATCTGC GAGCGCACCT ACTGCCAGAC CATGGGCATC GAATTTCTGC ACATCTCCAA CGGAGCGCAG AAGGCCTGGA TCCAGGAACG GATCGAAGGT CCGGACAAGG AGATCAGCTT CACCCGCGAG GGCCGTCGCG CGATCCTGAT GAAGCTGATC GAATCCGAAG GCTTCGAGAA GTTCTGCGAC CTGAAGTTCA CCGGCACCAA GCGGTTCGGT CTCGATGGCG GCGAAGCGCT GATCCCGGCG CTGGAGCAGA TCATCAAGCG CGGCGGCAAC CTCGGCGTCC GTGAAATCGT GCTCGGCATG CCGCATCGCG GCCGCCTCAA CGTGCTGACC CAGGTGATGG CCAAGGCCCA CCGGGCGCTG TTCCACGAGT TCAAGGGCGG TTCGGCCAAT CCGGACGAGG TCGAAGGCTC GGGCGACGTC AAATATCACC TCGGCGCCTC GTCGGACCGC GAGTTCGACC ACAACAAGGT CCACCTGTCG CTGACCGCCA ACCCGTCCCA CCTCGAGATC GTTGATCCGG TGGTGCTCGG CAAGGTGCGC GCCAAGCAGG ATCAGCATGG CGATCTGCCG GAAGAGCGCA TCTCGGTGCT GCCGCTGCTG ATGCACGGCG ACGCCGCGTT TGCCGGCCAG GGCGTGGTCG CCGAGTGCTT CGCTCTGTCC GATCTGAAGG GCTACCGCAC CGGCGGTTCG ATCCACTTCA TCGTCAACAA CCAGATCGGC TTCACCACCT ATCCGCGCTA TTCGCGCTCC TCGCCGTATC CGTCGGATGT GGCGAAGATG ATCGACGCGC CCATCTTCCA CGTGAACGGC GACGATCCGG AAGCGGTGGT GTTCGCCGCC AAGATCGCGG TCGAGTACCG GCAGAAGTTC CACAAGCCGG TCGTCATCGA CATGTTCTGC TACCGGCGGC ACGGCCACAA CGAGGGCGAT GAGCCGTCGT TCACCCAGCC GCTGATGTAC CGCAAGATCG CCGGCCATCC GACCACGCTG GAGATCTACT CCAAGCGGCT GATCGCCGAC GGCGTGATCA CCGAAGGCGA AGTCGAAAAG GCGCGGGCCG ACTGGCGCGC CCGGCTCGAT GCCGAATTCG AAGCCGCGTC CAGCTATCGG CCGAACAAGG CCGACTGGCT CGACGGCAAG TGGGCCGGCT TCAAGTCCGC CGACCAGGAA GAGGAGCCGC GCCGCGGCAT CACCGGCGTC GACCTGCCGA CCCTCAAGGA AATCGGCCGC AGGATCACCA AGGTGCCGGA GGGCTTCCGC CTGCACCGCA CCGTGCAGCG CTTCCTCGAA AACCGCGCCC GCGCGATCGA CAGCGGCAAC GGTCTCGACT GGGCGACCGG CGAAGCGCTG GCGTTCTGCA CCATGCTGCT GGAAGGCCAT CGCATCCGGC TGTCGGGCCA GGACTCCGAA CGCGGCACCT TCTCGCAGCG CCATTCGGTG CTGATCGATC AGGAAGACGA GACCCGCTAC ACCCCGTTCA ATCACCTCTC GCCCGACCAG GGCCACTATG AGGTGATCAA CTCGCTGCTG TCCGAAGAGG CGGTGCTCGG CTTCGAATAC GGCTATTCGC TGGCCGAGCC GAACGCGCTG ACGCTGTGGG AAGCCCAGTT CGGCGATTTC GCCAACGGCG CCCAGGTGCT GTTCGACCAG TTCATCTCGT CGGGCGAGCG CAAGTGGCTG CGCATGTCGG GTCTGGTCTG CCTGCTGCCG CACGGCTACG AGGGCCAGGG CCCGGAGCAC TCCTCGGCCC GCCTCGAGCG CTATCTGCAG ATGTGCGCCG AAGACAACAT GCAGGTGGTG TATCCGACCA CCCCGGCGAA CTACTTCCAT GCGCTCCGCC GTCAGCTCAA GCGCGAGATC CGCAAGCCCT TGATCCTGAT GACGCCGAAG TCGCTGCTTC GCCACAAGCG GGCGATCTCA CGGCTCGAAG AGCTCGGCCC CGATACCAGC TTCCACCGCG TGCTGCTCGA CGACGCGCAG ACGCTGCCGG ACGACAAGAC CAAGCTGGTG GCGGACGCCA AGATCCGCCG CGTCGTGGTG TGCTCGGGCA AGGTCTATTA CGACCTCTAC GACGAGCGCG AGAAGCGCGG CATCGACGAC GTCTATCTGC TGCGCGTCGA GCAGCTCTAT CCGGTGCCGG TGAAGACGCT GGTGCACGAG CTGTCGCGCT TCAAGGATGC GGAGCTGGTG TGGTGTCAGG AAGAGCCGCG CAACATGGGC GGCTGGCACT TCATCGAGCC GTATCTGGAG TGGGTGCAGA ACCAGATCGA AGCCAAGCAT CGCCGGCCGC GTTACGTCGG CCGTGCCGCC TCGGCGGCGA CTGCGACCGG CCTGATGTCG AAGCACCTCG CGCAGCTCAA GGCGTTCCTC GACGAAGCGT TGCGTTGA
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Protein sequence | MSRQDANAAF ALSSFLQGAN ATYIDDLYSR YESDPSSVDA DWQAFFRSLK DAPGDIQKNA EGPSWEQANW PLTPRDELTS ALDGNWNQVE KAVGQKIQAK AQSRGVELSS ADVLQATRDS VRALMLIRAY RMRGHFHAKL DPLGLSPAKD HEELDIRSYG FTEADLDRKI FLDHVLGLEY GSLREIVAIC ERTYCQTMGI EFLHISNGAQ KAWIQERIEG PDKEISFTRE GRRAILMKLI ESEGFEKFCD LKFTGTKRFG LDGGEALIPA LEQIIKRGGN LGVREIVLGM PHRGRLNVLT QVMAKAHRAL FHEFKGGSAN PDEVEGSGDV KYHLGASSDR EFDHNKVHLS LTANPSHLEI VDPVVLGKVR AKQDQHGDLP EERISVLPLL MHGDAAFAGQ GVVAECFALS DLKGYRTGGS IHFIVNNQIG FTTYPRYSRS SPYPSDVAKM IDAPIFHVNG DDPEAVVFAA KIAVEYRQKF HKPVVIDMFC YRRHGHNEGD EPSFTQPLMY RKIAGHPTTL EIYSKRLIAD GVITEGEVEK ARADWRARLD AEFEAASSYR PNKADWLDGK WAGFKSADQE EEPRRGITGV DLPTLKEIGR RITKVPEGFR LHRTVQRFLE NRARAIDSGN GLDWATGEAL AFCTMLLEGH RIRLSGQDSE RGTFSQRHSV LIDQEDETRY TPFNHLSPDQ GHYEVINSLL SEEAVLGFEY GYSLAEPNAL TLWEAQFGDF ANGAQVLFDQ FISSGERKWL RMSGLVCLLP HGYEGQGPEH SSARLERYLQ MCAEDNMQVV YPTTPANYFH ALRRQLKREI RKPLILMTPK SLLRHKRAIS RLEELGPDTS FHRVLLDDAQ TLPDDKTKLV ADAKIRRVVV CSGKVYYDLY DEREKRGIDD VYLLRVEQLY PVPVKTLVHE LSRFKDAELV WCQEEPRNMG GWHFIEPYLE WVQNQIEAKH RRPRYVGRAA SAATATGLMS KHLAQLKAFL DEALR
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