Gene Rpal_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0182 
Symbol 
ID6407826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp198031 
End bp198432 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content65% 
IMG OID642710092 
Producthypothetical protein 
Protein accessionYP_001989220 
Protein GI192288615 
COG category[S] Function unknown 
COG ID[COG3686] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCCGA TGCCGACCGA GATCACGGTG CTGGGCTGGA GCGTGGTGCT GCTGATCGTG 
CAGATGTTCC TGGCTTCCAT CCCGACCACC ATGGAGCTAG GCGGCGACTA TCAGGCGGGT
CCCCGAGACG AGCCACGAAC GCCGACGGGG CGGTTTGCCG GCCGCGCCAA CCGGGCCTTC
CGCAATCTGC TCGAAACCTA TCCGGCGTTC GTCGGTCTGG CGCTGGCTTT GGCGATCACC
GGCAAGGCGG GCGGCTACGC TGCCACGGCC TCGGTGGTCT GGCTGATCGC CCGCGCATTG
TATGCGCCGC TGTACATCAT CGAAATCCCG TTCGCCCGCA GCATTGTCTG GTTCGTGTCG
CTGTTGGCGC TGATCGCGAT GCTGGTCCGG CTATTGAGTT GA
 
Protein sequence
MPPMPTEITV LGWSVVLLIV QMFLASIPTT MELGGDYQAG PRDEPRTPTG RFAGRANRAF 
RNLLETYPAF VGLALALAIT GKAGGYAATA SVVWLIARAL YAPLYIIEIP FARSIVWFVS
LLALIAMLVR LLS