| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0181 |
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| Symbol | |
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| ID | 6407825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 197277 |
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| End bp | 198023 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710091 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001989219 |
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| Protein GI | 192288614 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATC GCGTCGTCAT CATCACCGGA GGCAGCCGCG GCATCGGCCG GGCCACTGCG
CTGGGTTGTG CGAAGCGCGG CTTCAAGGTC GTGGTCGGCT ACGCCAGTAA TGCCGCCGCG
GCCGACGAGG TGGTGGCCGA GATAGCAGCC AGCAATGGCA AGGCTATCGC GGTGAAATGC
GACGTCGGCA GCGAAGCCGA CATTCTCGCG CTGTTCGCTG CCGCGGACGC GTTCGGTCCG
CTCGGCGCGC TGGTCAATAA TGCTGGCATC GTCGGACCGA CCGCGCGGGT CGACGAGATG
TCGGCCGAAC GCATTCAGCG GATGATGGCG GTTAACGTCA CCGGCAGCAT TCTGTGCGCG
CGTGAGGCGG TGAAGCGGAT GTCGACCCGG CACGGCGGTA AGGGCGGCGT CATCGTCAAT
CTGTCATCGG TCGCGGCCAA ACTCGGCTCG CCAAATACCT ATGTCGACTA CGCGGCCTCC
AAGGGTGCGG TCGACTCCTT CACGGTCGGG CTCGGCCACG AAGTCGCCGG CGAAGGCATT
CGCGTCGCGG CGATCCGGCC TGGATTGATC GATACCGAGA TCCACGCCTC GGGCGGCGAT
CCGGAACGCG CGCATCGGCT CAGCGTCAAC GTGCCGATGA AGCGCGTCGG CCGCGCCGAG
GAAATCGCCA ACGCCGTCGT CTGGCTGCTG TCCGACGAGG CCTCCTATGT CACCAGCGCC
ATCATCGACG TGTCGGGGGG ACGATAG
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| Protein sequence | MNDRVVIITG GSRGIGRATA LGCAKRGFKV VVGYASNAAA ADEVVAEIAA SNGKAIAVKC
DVGSEADILA LFAAADAFGP LGALVNNAGI VGPTARVDEM SAERIQRMMA VNVTGSILCA
REAVKRMSTR HGGKGGVIVN LSSVAAKLGS PNTYVDYAAS KGAVDSFTVG LGHEVAGEGI
RVAAIRPGLI DTEIHASGGD PERAHRLSVN VPMKRVGRAE EIANAVVWLL SDEASYVTSA
IIDVSGGR
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