| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0177 |
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| Symbol | xerC |
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| ID | 6407821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 193494 |
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| End bp | 194465 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642710087 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_001989215 |
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| Protein GI | 192288610 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCCCT CCAAATCCGC GCCTCCGCCT CTCGAACTCA GCTGTGCGGC TGCAGATCTC
ACCGCCGAGA TGACAAAATG GCTGTCGCAT CTGCGGGCCG AGCGGCGGCT GTCCGGCAAG
ACGCTGGAAG CCTATGCGCG CGACGTGCGG CAGTTTCTGC AATTCCTGGC CGAGCATTGG
GGCGGCGAAG TCACGCTCGG CCGGTTCGCA CGGCTGGAGG CGACCGACGT CCGCGCCTTC
ATGGCGGCGC GGCGGGCGGA CGAGATCGCG GGGCGCTCGC TGATGCGCGC GCTGGCGGGC
ATGCGTTCGT TCGGGCGCTT TCTCGAACGA GAAGGCAAGG GGCGGGTCGG CGCGCTGGCC
TCGGTGCGGG CGCCGAAGAT CAAGAAAAGC CTGCCGAAGC CGCTGCCGAT CGCGGCCGCC
AAGCGGCTTG CGGACGCCGA CGAGCGCGCC GGCGAGGAGC GCGAGACCTG GGTGCTGATT
CGCGACGCCG CCGTGATGGC GCTGCTGTAC GGCTCCGGCC TGCGTATCTC CGAAGCGCTC
GGCCTGAAGC GCCGTGACGT GCCGGCGGCC GGCAAGGGCG ACACCCTGAT CGTGCACGGC
AAAGGCAACA AAACCCGCAT GGTGCCGGTG CTGCAGAACG TGCTCGCGCA GATCGCCGAG
TATGCAGCGG CCTGCCCCTA CAACCTGCCG CCGGATGGAC CGATGTTCGT GGGGGCCCGC
GGCGGGCCGC TCAGTCCGCG AATCATTCAG CTGGCGATGG AACGGCTGCG CGGCGGACTC
GGGCTGCCGG ACAGCGCGAC GCCCCACGCA CTGCGGCATT CGTTTGCGAC GCATTTGCTC
AGTCGCGGCG GCGACCTGCG CGCCATCCAG GAATTACTCG GTCACGCCTC GCTGTCGACC
ACACAGGTCT ATACCGGCAT CGATACCGAG CGGCTGCTGG AAGTCTATAA CAGCGCCCAT
CCGCGGGCCT GA
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| Protein sequence | MAPSKSAPPP LELSCAAADL TAEMTKWLSH LRAERRLSGK TLEAYARDVR QFLQFLAEHW
GGEVTLGRFA RLEATDVRAF MAARRADEIA GRSLMRALAG MRSFGRFLER EGKGRVGALA
SVRAPKIKKS LPKPLPIAAA KRLADADERA GEERETWVLI RDAAVMALLY GSGLRISEAL
GLKRRDVPAA GKGDTLIVHG KGNKTRMVPV LQNVLAQIAE YAAACPYNLP PDGPMFVGAR
GGPLSPRIIQ LAMERLRGGL GLPDSATPHA LRHSFATHLL SRGGDLRAIQ ELLGHASLST
TQVYTGIDTE RLLEVYNSAH PRA
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