Gene Rpal_0175 details

Gene Information

• Locus tag: Rpal_0175
• ID: 6407819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 190456
• End bp: 190926
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 642710085
• Product: rare lipoprotein A
• Protein accession: YP_001989213
• Protein GI: 192288608
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0797] Lipoproteins
• TIGRFAM ID: [TIGR00413] rare lipoprotein A

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTCGAA AGAAAACACC GGCGCTGCTC ACCACCGGGC CGGCTGCGGC CGCGGCGATG 
ATCGTCGCCT CTGTCTTCCT TGGCGGATCG GTAGGCGAGG CCTCGGCGAA GAGCCGGCAT 
CACCGCCACC ACCACCATAG CCACCACAGC GACTGGCGCT CAGCCAATGC GTCGGTGGAG 
AGCAGCGGTG GCCGCAGCTT CTCCGGTATG GCTTCGTACT ACGGCAATGA GTCCGGCAGC 
CGCACCGCAT CGGGCCAGCG CATGAACGCC AACGCGATGA CCGCCGCGCA CCGCACGCTG 
CCCTTCGGGA CTAAGCTGCG CGTCACCCAC GGAGGCCGCA GCGTCGTCGT CACCATCAAC 
GATCGCGGGC CGTTCATTCG CGGCCGCGTT CTCGACCTGT CGACCGGAGC CGCGCGCGCG 
ATCGGTCTGA CCAGCCGCGG AGTCGGCCGG GTCGTTGCGG AAGTGATGTA A 

 

Protein sequence

MVRKKTPALL TTGPAAAAAM IVASVFLGGS VGEASAKSRH HRHHHHSHHS DWRSANASVE 
SSGGRSFSGM ASYYGNESGS RTASGQRMNA NAMTAAHRTL PFGTKLRVTH GGRSVVVTIN 
DRGPFIRGRV LDLSTGAARA IGLTSRGVGR VVAEVM