| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0168 |
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| Symbol | |
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| ID | 6407812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 182970 |
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| End bp | 183917 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642710078 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001989206 |
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| Protein GI | 192288601 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.380397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTGT CCCGACGAAT TCTCGTGAGC GGCGGCGCCG GCTTCATCGG CTCGCACCTC
TGCGACAAGC TGTTGGCCGA AGGCCATGAA ATTCTGTGCG TCGACAATTA TTTCACCGGC
TGGCGCCGCA ACATCGAACA TCTGGTCGGC ACCCCGCGGT TCGAGGTGAT GCGCCACGAC
GTCACCTTCC CGCTCTATGT CGAAGTCGAC GACATCTACA ACCTCGCCTG CCCGGCCTCG
CCGGTGCACT ATCAGCACGA TCCGGTGCAG ACGCTGAAGA CCAGCGTGCA TGGCGCGATC
AACATGCTGG GCCTCGCCAA GCGGACCCGC GCCAAGATTT TCCAAGCCTC GACCAGCGAA
GTGTACGGCG ACCCGAACGT GCATCCGCAG CCGGAGAGCT ATTGGGGCCA CGTCAATCCG
CTCGGCATCC GGGCCTGTTA CGATGAAGGC AAGCGCGCCG CCGAGACGCT GTTCTTCGAC
TATCATCGCC AGCACAAGGT GAAGATCAAG GTCGGGCGGA TATTCAACAC TTACGGGCCG
CGGATGCATC CCAATGACGG CCGCGTGGTG TCGAACTTCA TCGTCCAGGC GCTGTCCGGC
AACGACATCA CCATCTATGG CGACGGCAGC CAGACGCGGT CGTTCTGCTA CGTCACCGAC
CTGCTCGATG GGTTCGCCAG GCTGATGGCG ACGGGCGACG AATTCATCGG ACCGGTCAAT
CTCGGCAATC CGGTCGAGTT CACCATTCGG CAACTCGCCG AGATGGTGAT CGAGATGACC
GACTCGAGAT CCAAGCTGGT GATGATGCCG CTGCCGTCGG ACGATCCGCG CCAGCGCCAG
CCTGATATCT CGCTGGCCCG CCGCGAGCTC GGCTGGGAGC CGAAGGTGCC GCTCGCCGAC
GGGCTCAAGG AAACCATCGG TTACTTCCGC ACCCTGATGG CATCGTGA
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| Protein sequence | MRLSRRILVS GGAGFIGSHL CDKLLAEGHE ILCVDNYFTG WRRNIEHLVG TPRFEVMRHD
VTFPLYVEVD DIYNLACPAS PVHYQHDPVQ TLKTSVHGAI NMLGLAKRTR AKIFQASTSE
VYGDPNVHPQ PESYWGHVNP LGIRACYDEG KRAAETLFFD YHRQHKVKIK VGRIFNTYGP
RMHPNDGRVV SNFIVQALSG NDITIYGDGS QTRSFCYVTD LLDGFARLMA TGDEFIGPVN
LGNPVEFTIR QLAEMVIEMT DSRSKLVMMP LPSDDPRQRQ PDISLARREL GWEPKVPLAD
GLKETIGYFR TLMAS
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