| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0164 |
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| Symbol | |
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| ID | 6407808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 178140 |
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| End bp | 179516 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710074 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001989202 |
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| Protein GI | 192288597 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCA AGACTTCGGT AATCCTCCTC AGCGCCGTCA CCGGTGCCGC GCTGACACTT
TTCGTCACCC AACCTCGCAC GATGCTGATG GGCGCCACCG CCCGCGCCGC CACCTCCGAC
ACCTACCGCC AGCTCAACCT GTTCGGCGAC GTGTTCGAGC GCGTGCGCAG CGACTACGTC
GAGAAGCCGG ACGACTCCAA ACTGGTCGAA TCCGCCATCA GCGGCATGCT GGCCGGACTC
GATCCGCATT CCAGCTACAT GGATGCCAAG AGCTTCCGTG ACATGCAGGT GCAGACCCGC
GGCGAATTCG GTGGTCTCGG CATCGAAGTC ACGATGGAAG ACGGCCTGAT CAAGGTGGTG
TCGCCGATCG ACGATACGCC TGCGTCGAAG GCCGGCATTC TGGCTAACGA CATCATCACC
AATCTCGACG ACGAGGCGGT GCAGGGCCTG ACCCTGAACC AGGCGGTCGA GAAGATGCGC
GGTCCGGTCA ACACCAAGAT CCGGCTGAAG ATCGTCCGCA AGGGCCAGGA CAACCCGATC
GAAGTCACGC TGGTACGCGA CAACATCCGC GTCCGCTCGG TGCGCGCGCG CGTCGAAGAC
AGCGACATCG GCTACATCCG CATCACGACC TTCAACGAGC AGACCACCGA AGGGCTCAAG
AAGGAGATTG CGAACCTGAC CAACCAGATC GGCGCCGACA AGCTGAAGGG CTTCATCCTC
GATCTGCGCA ACAACCCGGG CGGTCTGCTC GAGGAAGCCG TGACGGTGTC GGACGCGTTC
CTGGATCGCG GCGAGATCGT CTCGACTCGC GGCCGCAACG CCGAAGAGAC CCAGCGCCGC
TCCGCGCATG CGGGCGACCT CACCAAGGGC AAGCCGGTGA TCGTGCTGAT CAACGGCGGC
TCGGCCTCGG CGTCGGAAAT CGTCGCCGGT GCGCTGCAGG ATCACAAGCG CGCCACCGTG
GTCGGCACCC GTTCGTTCGG TAAGGGCTCT GTGCAGACCA TCATCCCGCT CGGCTCCGGC
AACGGCGCGC TGCGGCTGAC CACGGCGCGC TACTACACGC CGTCCGGCAA GTCGATCCAG
GCCAAGGGCA TCACGCCGGA TATCGAAGTG ATGCAGGACG TGCCGGCCGA CCTCAAGGCG
CGGACCGACA CCAAGGGCGA AGCCTCGCTG CGCGGCCATC TGAAGGGCGC CGACGGCGAC
GAGAAGACCG GCTCGCAGTC CTACGTGCCG CCGGAAGCCA AGGACGACAA GGCGCTGAAG
GCCGCGGCCG ATCTGCTGCA CGGCATCAAG GTCAACGCTT CGGCCCCGGC CGACAAGCAG
ACCACCGGCG ACAAGGCGGC GATCGACAAG CCGGCCGGCA ACAAGGCGGC GAACTGA
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| Protein sequence | MMRKTSVILL SAVTGAALTL FVTQPRTMLM GATARAATSD TYRQLNLFGD VFERVRSDYV
EKPDDSKLVE SAISGMLAGL DPHSSYMDAK SFRDMQVQTR GEFGGLGIEV TMEDGLIKVV
SPIDDTPASK AGILANDIIT NLDDEAVQGL TLNQAVEKMR GPVNTKIRLK IVRKGQDNPI
EVTLVRDNIR VRSVRARVED SDIGYIRITT FNEQTTEGLK KEIANLTNQI GADKLKGFIL
DLRNNPGGLL EEAVTVSDAF LDRGEIVSTR GRNAEETQRR SAHAGDLTKG KPVIVLINGG
SASASEIVAG ALQDHKRATV VGTRSFGKGS VQTIIPLGSG NGALRLTTAR YYTPSGKSIQ
AKGITPDIEV MQDVPADLKA RTDTKGEASL RGHLKGADGD EKTGSQSYVP PEAKDDKALK
AAADLLHGIK VNASAPADKQ TTGDKAAIDK PAGNKAAN
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