Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0164 |
Symbol | |
ID | 6407808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 178140 |
End bp | 179516 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642710074 |
Product | carboxyl-terminal protease |
Protein accession | YP_001989202 |
Protein GI | 192288597 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGCA AGACTTCGGT AATCCTCCTC AGCGCCGTCA CCGGTGCCGC GCTGACACTT TTCGTCACCC AACCTCGCAC GATGCTGATG GGCGCCACCG CCCGCGCCGC CACCTCCGAC ACCTACCGCC AGCTCAACCT GTTCGGCGAC GTGTTCGAGC GCGTGCGCAG CGACTACGTC GAGAAGCCGG ACGACTCCAA ACTGGTCGAA TCCGCCATCA GCGGCATGCT GGCCGGACTC GATCCGCATT CCAGCTACAT GGATGCCAAG AGCTTCCGTG ACATGCAGGT GCAGACCCGC GGCGAATTCG GTGGTCTCGG CATCGAAGTC ACGATGGAAG ACGGCCTGAT CAAGGTGGTG TCGCCGATCG ACGATACGCC TGCGTCGAAG GCCGGCATTC TGGCTAACGA CATCATCACC AATCTCGACG ACGAGGCGGT GCAGGGCCTG ACCCTGAACC AGGCGGTCGA GAAGATGCGC GGTCCGGTCA ACACCAAGAT CCGGCTGAAG ATCGTCCGCA AGGGCCAGGA CAACCCGATC GAAGTCACGC TGGTACGCGA CAACATCCGC GTCCGCTCGG TGCGCGCGCG CGTCGAAGAC AGCGACATCG GCTACATCCG CATCACGACC TTCAACGAGC AGACCACCGA AGGGCTCAAG AAGGAGATTG CGAACCTGAC CAACCAGATC GGCGCCGACA AGCTGAAGGG CTTCATCCTC GATCTGCGCA ACAACCCGGG CGGTCTGCTC GAGGAAGCCG TGACGGTGTC GGACGCGTTC CTGGATCGCG GCGAGATCGT CTCGACTCGC GGCCGCAACG CCGAAGAGAC CCAGCGCCGC TCCGCGCATG CGGGCGACCT CACCAAGGGC AAGCCGGTGA TCGTGCTGAT CAACGGCGGC TCGGCCTCGG CGTCGGAAAT CGTCGCCGGT GCGCTGCAGG ATCACAAGCG CGCCACCGTG GTCGGCACCC GTTCGTTCGG TAAGGGCTCT GTGCAGACCA TCATCCCGCT CGGCTCCGGC AACGGCGCGC TGCGGCTGAC CACGGCGCGC TACTACACGC CGTCCGGCAA GTCGATCCAG GCCAAGGGCA TCACGCCGGA TATCGAAGTG ATGCAGGACG TGCCGGCCGA CCTCAAGGCG CGGACCGACA CCAAGGGCGA AGCCTCGCTG CGCGGCCATC TGAAGGGCGC CGACGGCGAC GAGAAGACCG GCTCGCAGTC CTACGTGCCG CCGGAAGCCA AGGACGACAA GGCGCTGAAG GCCGCGGCCG ATCTGCTGCA CGGCATCAAG GTCAACGCTT CGGCCCCGGC CGACAAGCAG ACCACCGGCG ACAAGGCGGC GATCGACAAG CCGGCCGGCA ACAAGGCGGC GAACTGA
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Protein sequence | MMRKTSVILL SAVTGAALTL FVTQPRTMLM GATARAATSD TYRQLNLFGD VFERVRSDYV EKPDDSKLVE SAISGMLAGL DPHSSYMDAK SFRDMQVQTR GEFGGLGIEV TMEDGLIKVV SPIDDTPASK AGILANDIIT NLDDEAVQGL TLNQAVEKMR GPVNTKIRLK IVRKGQDNPI EVTLVRDNIR VRSVRARVED SDIGYIRITT FNEQTTEGLK KEIANLTNQI GADKLKGFIL DLRNNPGGLL EEAVTVSDAF LDRGEIVSTR GRNAEETQRR SAHAGDLTKG KPVIVLINGG SASASEIVAG ALQDHKRATV VGTRSFGKGS VQTIIPLGSG NGALRLTTAR YYTPSGKSIQ AKGITPDIEV MQDVPADLKA RTDTKGEASL RGHLKGADGD EKTGSQSYVP PEAKDDKALK AAADLLHGIK VNASAPADKQ TTGDKAAIDK PAGNKAAN
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