| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0163 |
|---|
| Symbol | |
|---|
| ID | 6407807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 176752 |
|---|
| End bp | 178143 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642710073 |
|---|
| Product | Peptidase M23 |
|---|
| Protein accession | YP_001989201 |
|---|
| Protein GI | 192288596 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG4942] Membrane-bound metallopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCAC CGCGCAACAC GGCTGCGAGG CACCATGTGG CTGCCGGCTC CTGGCGGCCA
GCGGTCCTAT TGTCCGCAGG CCTCGCTGCG GGCTTGTGGG CGAACGACGT GGCGCGTCCC
AACGGGGTGC TGATCAGCTC CGCGAAGGCA CAGACGGCGC CGGCCGCCAC GACGACCGCG
CCGTCGATGG CGGATCTGAT CAAACAACAC GAGCAGGAGC TGGAGGCCGC GCGCGCGCAG
CAGAAAAGCG CCGCCGAGCA GCAGGACAAG CTCAAGGCCG ATCTGGCCGC GATCGGCGCC
GACCGCACCA AGCTCAACCA GGAACTGATC GACGTCGCCG CCAAGGTGCG GGCGGTCGAA
ACCCGGATCA GCGACGCTGA AGCGCGCTTG CGCCCGCTCG ACGCCCGCGA GGCTGAAATC
CGCACCTCGC TGGACGCCCG CCGTGGCGAG ATCGGCGAGG TGCTGGCTGC CCTGCAGCGC
GCCGGGCGCC GCGCTCCGCC TGCGCTGCTG GTGCGTCCCG AAGACGCCTT GGAGTCGCTG
CGCACCGCAA TCCTGCTCGG CGCCGTGGTG CCGGAATTGC GGACCCGCGC CGAGCGCCTC
GCCACCGATC TCGGCGAACT GATCGCCGTG CGACAGAGGA TCGCCGCCGA GCGCGACCAA
CTCGCCGCCG ATCGCAGCCA CCTGACCACC GACCAGACCC GGCTCGCCGC CTTGGTCGAG
GAGCGGCAAC GGCAACAGAG CGCGGTCGAG AAGGACATCG AGGCCGAGCG CGGCCGGGCG
CTGACGCTGT CACGCCAGGT CGACAGCCTC CAGGGCCTGA TCGCCAAGAT GGAGCAGGAC
CTCAAGAGCG CCGCGAAGGC TGCGGCCGCC GCCGATCAGA AGGGCGCGCC GGCCGCCGGC
AAGGCCAATC TGGCGGCGTT GAAGGATCCC GGCCGGCTGA GCCCGGCGAT CGCGTTCGCG
TCCGCAAAGG GCATGCTGCC GCTGCCGGTC AACGGCACCA AGATCCGCGA ATTCGGCCGC
CCCGACGGGG TCGGCGGCGT CGAGCGCGGC ATCTCACTGT CAACGCGCGC AGGCGCCCAG
ATTACAACAC CTTGCGACGG CTGGGTGGTC TATGCTGGGC CGTTCCGCTC CTATGGACAA
CTCTTGATCC TCAATGCCGG TGGCGGGTAT CATGTCCTGA TCGCCGGGAT GGAGCGCATT
TCAGTCAATA TCGGCCAATT CGTGCTCACG GGAGAGCCGG TCGCGACCAT GGGTTCGACC
TCGCGGGTCG CCTCGATCCT CGCGGCCAAC GCCAGTCAGC CCGTGCTCTA CGTCGAGTTC
CGTAAAGACG GCACTCCCAT CGATCCAGGC CCATGGTGGG CCGCAAATGA AGGCGAGAAG
GTTCGCGGAT GA
|
|---|
| Protein sequence | MHAPRNTAAR HHVAAGSWRP AVLLSAGLAA GLWANDVARP NGVLISSAKA QTAPAATTTA
PSMADLIKQH EQELEAARAQ QKSAAEQQDK LKADLAAIGA DRTKLNQELI DVAAKVRAVE
TRISDAEARL RPLDAREAEI RTSLDARRGE IGEVLAALQR AGRRAPPALL VRPEDALESL
RTAILLGAVV PELRTRAERL ATDLGELIAV RQRIAAERDQ LAADRSHLTT DQTRLAALVE
ERQRQQSAVE KDIEAERGRA LTLSRQVDSL QGLIAKMEQD LKSAAKAAAA ADQKGAPAAG
KANLAALKDP GRLSPAIAFA SAKGMLPLPV NGTKIREFGR PDGVGGVERG ISLSTRAGAQ
ITTPCDGWVV YAGPFRSYGQ LLILNAGGGY HVLIAGMERI SVNIGQFVLT GEPVATMGST
SRVASILAAN ASQPVLYVEF RKDGTPIDPG PWWAANEGEK VRG
|
|---|
| |