Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0162 |
Symbol | |
ID | 6407806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 176250 |
End bp | 176732 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642710072 |
Product | rRNA large subunit methyltransferase |
Protein accession | YP_001989200 |
Protein GI | 192288595 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTAT TGATCCTGGC TGTCGGGAAG CTGAAACAGG GGCCGGAGCG CGAGCTCGCC GAGCGATATC GGGCGCGGTT CGACGACCTC GGCCGCAAGC TCGGCTTTCG CGGTCTTGAT GTCCATGAAA TTGCCGAAAG CCGCGCCCGC GAGGCGCCGG CACGGATGGC GGAAGAAGCC GCCGCGATCA TCGCTCAGGT GCAGGACGGG GCTGTGCTGG TTACGCTCGA CGAGCGCGGC CAGAGCCTTG GCAGCACGGC CTTCGCCGCT CAGCTCGGCC GCTGGCGGGA CGAGCAGGTG CCCGGTACTA TTTTCGTGAT CGGCGGAGCC GACGGACTTT TGCCTGAATT GCGGCGCAAG GCAAAGCTGA GCATGTCGTT CGGGGGGGCG ACATGGCCGC ACCAAATGGT TCGCGTGATG CTGCTGGAGC AGATCTATCG GGCCGCGACG ATTTTGGCGG GACATCCTTA TCATCGTGCG TAA
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Protein sequence | MRLLILAVGK LKQGPERELA ERYRARFDDL GRKLGFRGLD VHEIAESRAR EAPARMAEEA AAIIAQVQDG AVLVTLDERG QSLGSTAFAA QLGRWRDEQV PGTIFVIGGA DGLLPELRRK AKLSMSFGGA TWPHQMVRVM LLEQIYRAAT ILAGHPYHRA
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