Gene Rpal_0161 details

Gene Information

• Locus tag: Rpal_0161
• ID: 6407805
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 175708
• End bp: 176160
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642710071
• Product: iojap-like protein
• Protein accession: YP_001989199
• Protein GI: 192288594
• COG category: [S] Function unknown
• COG ID: [COG0799] Uncharacterized homolog of plant Iojap protein
• TIGRFAM ID: [TIGR00090] iojap-like ribosome-associated protein

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCGAAAT CGGTCGCGGC AAAGGCTTCG CGGTCCGCGT CAACCAGGAC TGCGCCAGTA 
CCGACCCCTG AGGCGATCGC TCCGGATACA TCGCAGTTCA AGGCTGCGCC GGATGCGGAA 
GCGACGCTGA AACTGATCCT CTCCCGCCTC GACGACATGA AGGCGGAGGA GACGGTGACC 
ATCGACCTCC GCGGCAAATC AGCGATGTTC GACTACGTGG TCGTCACCAC CGGACGGGCC 
AACCGTCACG TTGGCGCGAT CGCCGAAAAC GTCGTCAAGG CCCTGAAGCA GGCCGGCATC 
GCCGCGCCGC ACGTCGAAGG CTTGCCGAAC TGCGATTGGG TGCTGATCGA CAGCGGCGAC 
GTGGTGCTGC ACGTCTTCCG TCCCGAGGTC CGCGAATTCT ACAACCTCGA ACGGTTGTGG 
ACTCAAGGTC CGTCGCCGGC GAAGACACTG TAG 

 

Protein sequence

MPKSVAAKAS RSASTRTAPV PTPEAIAPDT SQFKAAPDAE ATLKLILSRL DDMKAEETVT 
IDLRGKSAMF DYVVVTTGRA NRHVGAIAEN VVKALKQAGI AAPHVEGLPN CDWVLIDSGD 
VVLHVFRPEV REFYNLERLW TQGPSPAKTL