Gene Rpal_0160 details

Gene Information

• Locus tag: Rpal_0160
• Symbol: nadD
• ID: 6407804
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 174864
• End bp: 175493
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642710070
• Product: nicotinic acid mononucleotide adenylyltransferase
• Protein accession: YP_001989198
• Protein GI: 192288593
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1057] Nicotinic acid mononucleotide adenylyltransferase
• TIGRFAM ID: [TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGACGG ACCTCGCCGC AGCCCGCCGC GCAATCCCGC CCTTCGCGCC GGGGATGCGG 
ATCGGCCTGC TCGGCGGCTC GTTCAATCCG CCGCATCTGG CGCATCGCGC GATCAGTCAG 
TTCGCTATCA AACGGCTGAA GCTCGATCGG GTGTGGTGGC TGGTATCGCC GGGCAATCCG 
CTGAAGGATA TCTCAAGCCT GCGCGAGATC GACGCCCGGG TTGCCGCGGC GCAGGCGATT 
GCGGACGATC CGCGCATCCA GGTCAGTCGT CTCGAAGCCG TCATCGGCAC CCGCTACACT 
GCAGACACTC TCCGCTATTT GCGCCGGCAT TGCCCCGGCG CTCGCTTCGT CTGGATCATG 
GGCGCCGACA ATCTGGCTCA GTTCCATCGC TGGCAGCAGT GGCAGCAGAT CGCGGCCGAG 
GTTCCGATCG CGGTGATCGA CCGTCCGCCG ACGAGCTTCC GCGCACTCGC GGCTCCCGCC 
GCTCAGCGCC TGATGCGAAT GCGAATTCCT AACAGCAAAG CTGCGACACT GGCGGATCGC 
GAGCCCCCTG CCTGGGTGTA TCTCACCGGG CTGAAATCGC CGGTGTCGTC GACCGCCTTG 
CGGAACCCCG ACGGAAGCTG GAAGACATGA 

 

Protein sequence

MTTDLAAARR AIPPFAPGMR IGLLGGSFNP PHLAHRAISQ FAIKRLKLDR VWWLVSPGNP 
LKDISSLREI DARVAAAQAI ADDPRIQVSR LEAVIGTRYT ADTLRYLRRH CPGARFVWIM 
GADNLAQFHR WQQWQQIAAE VPIAVIDRPP TSFRALAAPA AQRLMRMRIP NSKAATLADR 
EPPAWVYLTG LKSPVSSTAL RNPDGSWKT