| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0136 |
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| Symbol | |
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| ID | 6407779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 149123 |
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| End bp | 150115 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642710045 |
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| Product | ABC transporter substrate-binding protein |
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| Protein accession | YP_001989174 |
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| Protein GI | 192288569 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.778502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCCGC CACAGCATCT GATCCCCACT CGGCGCGATG TGGTGCGCGG CCTTGCGGCG
CTGCCGGCGC TGGGGTTGAC GCGGACGTTC GCCGCCGAGC CACTGACGCT GTGGGGGATT
CCGGCGACGC CGTCGGCGCT GTTCGTCCGC GCCGTGGCGT CGGAACAGCT GCAGCAGGCC
GCGCCCGGGA TCCGCTTTCA GCTCTGGAAG AGCACCGACC AGATGCGCGC CGGGATCGCG
TCGGGACAGT TTCGGCTGTT TGCGACTTCG ACCTACGCGG CCGCCAATTT CTTCAATCGC
GGCGCCGGGA CGCGCATGCT GAATGTCGTC ACCTGGGGTG TGCTCTACGT GATGGCGCGC
GATCCGGCCA TCAGGTCGGT CGCCGATCTC GCCGGCCGCA GCATTCTGCT GTCGAACAAG
AACGAAGCGC CCGATCTGTT GTTTCGGCTG GTGCTGCGCT GGGCCGGGCT CGATCCGGAC
CGCGACGTCC GCTGCGAATA TGTCGGCTCG CCGGGCGAGG CGGTGCCGCT GTTTCTCGCC
GGCCGCAGCG ACGTCGCCGT GCTGCACGAA CCCGCCGCCA CCACCGCGCT GCTACGCGCC
AAGCAGGAGG GAAAGCCGGT GTACCGAGTA TTGGACATCG CCGAACTGTA CGGCCGCCAC
GCTGGGCGAG GACCGCGGAT TCCGCAGGTC GGGCTTGCGG TCAGCGCCGA CCTGCTGGAT
ACCCAGCCCG GGCTCGTCGC TGCGGTGCAG GCCGCCTGCG TCGAGGCGAG CACCTGGATC
GCCGCGCATC CTGCAGAGGC CGCCGAGCTG GCCGCGCCGG CGCTCGGCCT GCCTGCCGAA
GTAATCGCGG CATCGCTGCC GCATGTCCGC CTCGACGTTG TTCCGGCGCG GCAGGCGCGT
GACGACATCG AAATGTACTT CAAGAATTTG ATGGAGCTCG ATCCCGGCAT CGTCGGCGGC
CGGCTGCCGG ACGCGGCGTT CTATGCGGGG TAG
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| Protein sequence | MSPPQHLIPT RRDVVRGLAA LPALGLTRTF AAEPLTLWGI PATPSALFVR AVASEQLQQA
APGIRFQLWK STDQMRAGIA SGQFRLFATS TYAAANFFNR GAGTRMLNVV TWGVLYVMAR
DPAIRSVADL AGRSILLSNK NEAPDLLFRL VLRWAGLDPD RDVRCEYVGS PGEAVPLFLA
GRSDVAVLHE PAATTALLRA KQEGKPVYRV LDIAELYGRH AGRGPRIPQV GLAVSADLLD
TQPGLVAAVQ AACVEASTWI AAHPAEAAEL AAPALGLPAE VIAASLPHVR LDVVPARQAR
DDIEMYFKNL MELDPGIVGG RLPDAAFYAG
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